PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG017510.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 533aa    MW: 58851.2 Da    PI: 5.2304
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG017510.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS173.71.4e-5373072303
              GRAS   2 velLlecAeavssgdlelaqalLarlsel..aspdg...dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                       ++lLl+ Aeav++gd + a a+ +rl  l   sp+     ++ Rla +f+++L++r+++ +++++  lp         s++++++++ +e+sP
  TRIDC4BG017510.8   7 TDLLLTGAEAVEAGDPRFALAVFSRLDGLllGSPENaaaGSFDRLAYHFAQGLRSRISSASTSCS--LPEP-----LPSDRMSVQQIIQELSP 92 
                       689***********************998885554422379*****************9322222..3222.....3568999********** PP

              GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
                       + kf+h+taNqaIl+a++g+++v ++D++i++G+QWp+L+  La    g  s+ +T+v + +   ++  +e ++rL++fA++l++pf+++ l 
  TRIDC4BG017510.8  93 FAKFAHFTANQAILDATKGDTHVNVVDLNIGEGIQWPSLMSDLARH--GGMSFHLTAVTADADYTNDVHHESARRLSEFADSLNLPFQYSSLC 183
                       ********************************************84..6689********8888***************************85 PP

              GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevL.klvkslsPkvvvvveqeadh.nse......sFlerflealeyysal 267
                        ++ ed  l+e+  +++ +++ ++    +       +l s+ +++L  +vk l+Pk++v+ve+e+ + ++e      sF++ f+eal++++++
  TRIDC4BG017510.8 184 LHSDED--LHEFFKNSKGSVIFSCDTTSMPY-----KLLSKLPALLpACVKLLQPKLMVIVEEELVRiGKEaslckaSFVDFFFEALHHFTTV 269
                       554444..47776666778888887744443.....45566778883579*************95443554566666**************** PP

              GRAS 268 fdsleaklpres..eerikvErellgreivnvvacega 303
                       f+sl++ ++  +     + vEre++g++i++ v + g+
  TRIDC4BG017510.8 270 FESLASCFAGGNqgACLRLVEREMVGPRIQDFVGQYGS 307
                       ****988888885667799*************988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    
MEENSLTDLL LTGAEAVEAG DPRFALAVFS RLDGLLLGSP ENAAAGSFDR LAYHFAQGLR  60
SRISSASTSC SLPEPLPSDR MSVQQIIQEL SPFAKFAHFT ANQAILDATK GDTHVNVVDL  120
NIGEGIQWPS LMSDLARHGG MSFHLTAVTA DADYTNDVHH ESARRLSEFA DSLNLPFQYS  180
SLCLHSDEDL HEFFKNSKGS VIFSCDTTSM PYKLLSKLPA LLPACVKLLQ PKLMVIVEEE  240
LVRIGKEASL CKASFVDFFF EALHHFTTVF ESLASCFAGG NQGACLRLVE REMVGPRIQD  300
FVGQYGSVTV EVTAPQVLER EGSSQLSTEV LISAVAGDLA SRFISFLAHI YDTRTCEDDD  360
RRRLELVLLR IHAVVEEAEG RHITNRRMFL QLKALIQGVY LGHYMLDRCK AVSGSTCLLW  420
ISSYDVDETT WANFQSYLQK LPGTEIKIVV TGRAEQVANL GTAQPIRLKS LSEEESWYYF  480
KALAFGSMDP DEHPKLASLG MQLATLLQGL FLGANIRATK SEPKCSILAW CIM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-27GRAS family protein