PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG015720.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 619aa    MW: 68528.9 Da    PI: 8.329
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG015720.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3536.3e-17331121398
                       TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                         rl +p +f  ++ +g++++   ++l+ +sg++W v+l      ++ ++ kGWkeFv+++ ++ g f++F++dgrs+f   v +f+
  TRIDC4BG015720.1  33 GERLKIPPSFN-QYlQGQPTG--VVSLKGQSGNKWLVEL--ASDNEGLFFVKGWKEFVRDHSIEMGHFLTFRYDGRSQF--SVVIFD 112
                       5689******8.565888877..7***************..888888******************************99..777776 PP
2B3482.3e-15513604398
                       EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                       ++++ s+v     l lp +f++e+   ++ +++l+l +++g+sW+v++ y   ++   l++GW +F  +n+L+  D++vF+l +  + + +v+
  TRIDC4BG015720.1 513 QIMKESYVYVGFFLNLPCEFVRECL--PRAHRKLKLWNPQGKSWDVNYVYYSERCVGGLSGGWGKFSLDNNLEKFDVCVFELFS--KDNIKVH 601
                       6788899999999***********5..345568***************887777777899*********************875..4446888 PP

                       EE- CS
                B3  96 vfr 98 
                       ++r
  TRIDC4BG015720.1 602 IYR 604
                       876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    
DNEKGKGKEQ ENGGEGGKFG QQFARVFLPQ LYGERLKIPP SFNQYLQGQP TGVVSLKGQS  60
GNKWLVELAS DNEGLFFVKG WKEFVRDHSI EMGHFLTFRY DGRSQFSVVI FDGMCIEKPS  120
AFHAKPCKNL VVKIESGKGD MDINAADPSQ VSAAPLEESN GTTRKRVTEM DADGSTSKNR  180
SSILENGMPE ASAVTCNVAP TSLNVDMNAA DPPEAVVVPL EESNQTTRKR IREIDANDSA  240
LQKSLRVREI DANDSALQKS SRVREIDAND SALQKSSRVR EIDANDSALH KSSRVREIDA  300
NDSALHKSSR VGEIDANDSA LHKSSWVREI DANDSALQKS SRVREIDAND WALQKSSRVR  360
EIDANDSSLK KSSGLREIDA NDSSLKKSSG LREIDANDSA LQKSSIASDK DKKRCPAASV  420
GTYKSASTSL DSTEDSDSSS SMLEQSISCI KSELTSPIRL GVSKDVARCG QNSATGKRQL  480
RVLSQRRLVT EIQKDNALLR AKQFKSKNPF CLQIMKESYV YVGFFLNLPC EFVRECLPRA  540
HRKLKLWNPQ GKSWDVNYVY YSERCVGGLS GGWGKFSLDN NLEKFDVCVF ELFSKDNIKV  600
HIYRVVPEIT PFLPGPGKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.13e-15B3 family protein