PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG015720.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 619aa MW: 68528.9 Da PI: 8.329

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG015720.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53	6.3e-17	33	112	13	98
TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 rl +p +f ++ +g++++ ++l+ +sg++W v+l ++ ++ kGWkeFv+++ ++ g f++F++dgrs+f v +f+ TRIDC4BG015720.1 33 GERLKIPPSFN-QYlQGQPTG--VVSLKGQSGNKWLVEL--ASDNEGLFFVKGWKEFVRDHSIEMGHFLTFRYDGRSQF--SVVIFD 112 5689****8.565888877..7***********..888888****************************99..777776 PP
2	B3	48	2.3e-15	513	604	3	98
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ++++ s+v l lp +f++e+ ++ +++l+l +++g+sW+v++ y ++ l++GW +F +n+L+ D++vF+l + + + +v+ TRIDC4BG015720.1 513 QIMKESYVYVGFFLNLPCEFVRECL--PRAHRKLKLWNPQGKSWDVNYVYYSERCVGGLSGGWGKFSLDNNLEKFDVCVFELFS--KDNIKVH 601 6788899999999*********5..345568***********887777777899*******************875..4446888 PP EE- CS B3 96 vfr 98 ++r TRIDC4BG015720.1 602 IYR 604 876 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
DNEKGKGKEQ ENGGEGGKFG QQFARVFLPQ LYGERLKIPP SFNQYLQGQP TGVVSLKGQS 60 GNKWLVELAS DNEGLFFVKG WKEFVRDHSI EMGHFLTFRY DGRSQFSVVI FDGMCIEKPS 120 AFHAKPCKNL VVKIESGKGD MDINAADPSQ VSAAPLEESN GTTRKRVTEM DADGSTSKNR 180 SSILENGMPE ASAVTCNVAP TSLNVDMNAA DPPEAVVVPL EESNQTTRKR IREIDANDSA 240 LQKSLRVREI DANDSALQKS SRVREIDAND SALQKSSRVR EIDANDSALH KSSRVREIDA 300 NDSALHKSSR VGEIDANDSA LHKSSWVREI DANDSALQKS SRVREIDAND WALQKSSRVR 360 EIDANDSSLK KSSGLREIDA NDSSLKKSSG LREIDANDSA LQKSSIASDK DKKRCPAASV 420 GTYKSASTSL DSTEDSDSSS SMLEQSISCI KSELTSPIRL GVSKDVARCG QNSATGKRQL 480 RVLSQRRLVT EIQKDNALLR AKQFKSKNPF CLQIMKESYV YVGFFLNLPC EFVRECLPRA 540 HRKLKLWNPQ GKSWDVNYVY YSERCVGGLS GGWGKFSLDN NLEKFDVCVF ELFSKDNIKV 600 HIYRVVPEIT PFLPGPGKK

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

DNEKGKGKEQ ENGGEGGKFG QQFARVFLPQ LYGERLKIPP SFNQYLQGQP TGVVSLKGQS  60
GNKWLVELAS DNEGLFFVKG WKEFVRDHSI EMGHFLTFRY DGRSQFSVVI FDGMCIEKPS  120
AFHAKPCKNL VVKIESGKGD MDINAADPSQ VSAAPLEESN GTTRKRVTEM DADGSTSKNR  180
SSILENGMPE ASAVTCNVAP TSLNVDMNAA DPPEAVVVPL EESNQTTRKR IREIDANDSA  240
LQKSLRVREI DANDSALQKS SRVREIDAND SALQKSSRVR EIDANDSALH KSSRVREIDA  300
NDSALHKSSR VGEIDANDSA LHKSSWVREI DANDSALQKS SRVREIDAND WALQKSSRVR  360
EIDANDSSLK KSSGLREIDA NDSSLKKSSG LREIDANDSA LQKSSIASDK DKKRCPAASV  420
GTYKSASTSL DSTEDSDSSS SMLEQSISCI KSELTSPIRL GVSKDVARCG QNSATGKRQL  480
RVLSQRRLVT EIQKDNALLR AKQFKSKNPF CLQIMKESYV YVGFFLNLPC EFVRECLPRA  540
HRKLKLWNPQ GKSWDVNYVY YSERCVGGLS GGWGKFSLDN NLEKFDVCVF ELFSKDNIKV  600
HIYRVVPEIT PFLPGPGKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	3e-15	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG015720.1