PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG014540.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 318aa MW: 33885.4 Da PI: 7.4073

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG014540.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	138.1	7.2e-43	26	179	3	134
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksa 94 ++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+eWLlqqa+pai ++tgt++ +a+++ a+s + as s+ a ++ TRIDC4BG014540.1 26 VAKRPTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETVEWLLQQAEPAIVAATGTGTVPANFStLAASLRPGAS---SRVAPFQH 115 689************************************************************9999977754444444444...22222233 PP TCP 95 akskksqksaasalnlakesr........................akarararertrekmrikn 134 + ++++q++ a++l ++ +++ a + +r+r+r++++ ++++ TRIDC4BG014540.1 116 HLQHQPQHDVAAMLGFHGHHQhqllppppqqqhhhqhpeapqdpgAGEFMRKRYREADDLFKDT 179 3444455555555555444333444444444444444444444449999999999999888775 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
ATPAGGQTAN HSQSITVAEP PSEKKVAKRP TKDRHTKVDG RGRRIRMPAL CAARVFQLTR 60 ELGHKTDGET VEWLLQQAEP AIVAATGTGT VPANFSTLAA SLRPGASSRV APFQHHLQHQ 120 PQHDVAAMLG FHGHHQHQLL PPPPQQQHHH QHPEAPQDPG AGEFMRKRYR EADDLFKDTG 180 RHQDPEDGGE PAQKSRPAPP PTAVSGAMWA VAPNSGAGGG GAFWMQPAWA FGAGNTVQAP 240 LQFISRSSFP GGMGDTNLGM LAGLNSCGRS TGGEQQHQQQ PQQEEEEGQP PEMDQHRRGS 300 TSAGANGHEA GHSAASPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35560.1	1e-52	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG014540.1