PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG013280.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 942aa MW: 103312 Da PI: 5.4722

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG013280.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.9	1.9e-28	588	638	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl+ l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC4BG013280.9 588 EKHVSLKILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 638 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 942 aa Download sequence
MLLKVNVSAG IEILCVLVQK DLILGGERSG MDENGTPDYS GGGSDMDLLM LSGFDDLDSF 60 PELGAGPSFS DGILPSFSVS PVQQVTHISP SPPSVDAEEQ GDVSITDGSD CSVSLASNEV 120 MNVSAPTVPK TVYGGVTLME RMLRALAMLK EASTAGPVLV QVWIPVRNGD HQVLTTSDQP 180 FLLDERLTGY REVSRQFTFS ATEGPGLFPG LPGRVFISGM PEWTSNVMYY NTSEFLRVDY 240 AIRNEVRGSL AMPVFNSSGG SCCAVLEVVM TQEKDNFCSE MDNLSNALQS VHLSTVRART 300 HPQSLTRNQQ SVLTEILDVL RAVCHTHMLP LALAWIPVCP NSSLNVSAEY GDQAIKFGLR 360 NKDVLCVQES ACYINDMRMH DFLRACAEHP LEKGQGVAGN AILSNHPFFS SDVREYDMHD 420 YPLAHHARKF GLHAAVAIRL RSTYTGNDDY VLEFFLPLTC KVREEQQLLL DDISMTMQRV 480 CSSLRTVSDA ELKENTTTMR SEIRCSSSDV SISSCNQIDV SSEVKINVPL ENQIKNSVEQ 540 LADKKYAKFE PGTTSQNFEN CSSTGKNVSL TLLQESTSDG LKIRSSTEKH VSLKILQQYF 600 AGSLKDAAKS IGVCPTTLKR ICRQHGISRW PSRKIKKVNR SLEKIQNVIS TVHGVDGVIK 660 YDPATGCIVS SVSHTEEPSM MNVEHRSSDS LPTECRKFQP DYDAYKREHL GQAVPHKAQN 720 EKRSETHINL NPGGLSRNSH FGRTSKGSEC QDASNDSYLT KEMICPGGME MWVEGAEQKN 780 VLWNSISMPQ QCKIEIETDK SNAIVEQSLA SSSSMTDCSS GGTSSDGTLK KCLKSRPVDG 840 SNASIVVKAA YKDDTVRLKL LPSMKYQDLL EEIAKRLKLS VGAFQLKYKD DEDEWVILAS 900 DADLQECLDV LDTTGARIMK VQVRDVPCAT GASSGSSFIS GQ

Sequence ? help Back to Top

Protein Sequence Length: 942 aa Download sequence

MLLKVNVSAG IEILCVLVQK DLILGGERSG MDENGTPDYS GGGSDMDLLM LSGFDDLDSF  60
PELGAGPSFS DGILPSFSVS PVQQVTHISP SPPSVDAEEQ GDVSITDGSD CSVSLASNEV  120
MNVSAPTVPK TVYGGVTLME RMLRALAMLK EASTAGPVLV QVWIPVRNGD HQVLTTSDQP  180
FLLDERLTGY REVSRQFTFS ATEGPGLFPG LPGRVFISGM PEWTSNVMYY NTSEFLRVDY  240
AIRNEVRGSL AMPVFNSSGG SCCAVLEVVM TQEKDNFCSE MDNLSNALQS VHLSTVRART  300
HPQSLTRNQQ SVLTEILDVL RAVCHTHMLP LALAWIPVCP NSSLNVSAEY GDQAIKFGLR  360
NKDVLCVQES ACYINDMRMH DFLRACAEHP LEKGQGVAGN AILSNHPFFS SDVREYDMHD  420
YPLAHHARKF GLHAAVAIRL RSTYTGNDDY VLEFFLPLTC KVREEQQLLL DDISMTMQRV  480
CSSLRTVSDA ELKENTTTMR SEIRCSSSDV SISSCNQIDV SSEVKINVPL ENQIKNSVEQ  540
LADKKYAKFE PGTTSQNFEN CSSTGKNVSL TLLQESTSDG LKIRSSTEKH VSLKILQQYF  600
AGSLKDAAKS IGVCPTTLKR ICRQHGISRW PSRKIKKVNR SLEKIQNVIS TVHGVDGVIK  660
YDPATGCIVS SVSHTEEPSM MNVEHRSSDS LPTECRKFQP DYDAYKREHL GQAVPHKAQN  720
EKRSETHINL NPGGLSRNSH FGRTSKGSEC QDASNDSYLT KEMICPGGME MWVEGAEQKN  780
VLWNSISMPQ QCKIEIETDK SNAIVEQSLA SSSSMTDCSS GGTSSDGTLK KCLKSRPVDG  840
SNASIVVKAA YKDDTVRLKL LPSMKYQDLL EEIAKRLKLS VGAFQLKYKD DEDEWVILAS  900
DADLQECLDV LDTTGARIMK VQVRDVPCAT GASSGSSFIS GQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-173	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG013280.9