PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG013280.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 952aa MW: 104689 Da PI: 5.7994

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG013280.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.9	2e-28	598	648	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl+ l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC4BG013280.8 598 EKHVSLKILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 648 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 952 aa Download sequence
ALHSPRIGFW FLRPRITRGI EILCVLVQKD LILGGERSGM DENGTPDYSG GGSDMDLLML 60 SGFDDLDSFP ELGAGPSFSD GILPSFSVSP VQQVTHISPS PPSVDAEEQG DVSITDGSDC 120 SVSLASNEVM NVSAPTVPKT VYGGVTLMER MLRALAMLKE ASTAGPVLVQ VWIPVRNGDH 180 QVLTTSDQPF LLDERLTGYR EVSRQFTFSA TEGPGLFPGL PGRVFISGMP EWTSNVMYYN 240 TSEFLRVDYA IRNEVRGSLA MPVFNSSGGS CCAVLEVVMT QEKDNFCSEM DNLSNALQSV 300 HLSTVRARTH PQQSLTRNQQ SVLTEILDVL RAVCHTHMLP LALAWIPVCP NSSLNVSAEY 360 GDQAIKFGLR NKDVLCVQES ACYINDMRMH DFLRACAEHP LEKGQGVAGN AILSNHPFFS 420 SDVREYDMHD YPLAHHARKF GLHAAVAIRL RSTYTGNDDY VLEFFLPLTC KVREEQQLLL 480 DDISMTMQRV CSSLRTVSDA ELKENTTTMR SEIRCSSSDV SISSCNQIDV SSEVKINVPL 540 ENQIKNSVEQ LADKKYAKFE PGTTSQNFEN CSSTGKNVSL TLLQESTSDG LKIRSSTEKH 600 VSLKILQQYF AGSLKDAAKS IGVCPTTLKR ICRQHGISRW PSRKIKKVNR SLEKIQNVIS 660 TVHGVDGVIK YDPATGCIVS SVSHTEEPSM MNVEHRSSDS LPTECRKFQP DYDAYKREHL 720 GQAVPHKAQN EKRSETHINL NPGGLSRNSH FGRTSKGSEC QDASNDSYLT KEMICPGGME 780 MWVEGAEQKN VLWNSISMPQ QCKIEIETDK SNAIVEQSLA SSSSMTDCSS GGTSSDGTLK 840 KCLKSRPVDG SNASIVVKAA YKDDTVRLKL LPSMKYQDLL EEIAKRLKLS VGAFQLKYKD 900 DEDEWVILAS DADLQECLDV LDTTGARIMK VQVRDVPCAT GASSGSSFIS GQ

Sequence ? help Back to Top

Protein Sequence Length: 952 aa Download sequence

ALHSPRIGFW FLRPRITRGI EILCVLVQKD LILGGERSGM DENGTPDYSG GGSDMDLLML  60
SGFDDLDSFP ELGAGPSFSD GILPSFSVSP VQQVTHISPS PPSVDAEEQG DVSITDGSDC  120
SVSLASNEVM NVSAPTVPKT VYGGVTLMER MLRALAMLKE ASTAGPVLVQ VWIPVRNGDH  180
QVLTTSDQPF LLDERLTGYR EVSRQFTFSA TEGPGLFPGL PGRVFISGMP EWTSNVMYYN  240
TSEFLRVDYA IRNEVRGSLA MPVFNSSGGS CCAVLEVVMT QEKDNFCSEM DNLSNALQSV  300
HLSTVRARTH PQQSLTRNQQ SVLTEILDVL RAVCHTHMLP LALAWIPVCP NSSLNVSAEY  360
GDQAIKFGLR NKDVLCVQES ACYINDMRMH DFLRACAEHP LEKGQGVAGN AILSNHPFFS  420
SDVREYDMHD YPLAHHARKF GLHAAVAIRL RSTYTGNDDY VLEFFLPLTC KVREEQQLLL  480
DDISMTMQRV CSSLRTVSDA ELKENTTTMR SEIRCSSSDV SISSCNQIDV SSEVKINVPL  540
ENQIKNSVEQ LADKKYAKFE PGTTSQNFEN CSSTGKNVSL TLLQESTSDG LKIRSSTEKH  600
VSLKILQQYF AGSLKDAAKS IGVCPTTLKR ICRQHGISRW PSRKIKKVNR SLEKIQNVIS  660
TVHGVDGVIK YDPATGCIVS SVSHTEEPSM MNVEHRSSDS LPTECRKFQP DYDAYKREHL  720
GQAVPHKAQN EKRSETHINL NPGGLSRNSH FGRTSKGSEC QDASNDSYLT KEMICPGGME  780
MWVEGAEQKN VLWNSISMPQ QCKIEIETDK SNAIVEQSLA SSSSMTDCSS GGTSSDGTLK  840
KCLKSRPVDG SNASIVVKAA YKDDTVRLKL LPSMKYQDLL EEIAKRLKLS VGAFQLKYKD  900
DEDEWVILAS DADLQECLDV LDTTGARIMK VQVRDVPCAT GASSGSSFIS GQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-173	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG013280.8