PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG013280.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Nin-like | ||||||||
Protein Properties | Length: 615aa MW: 68043 Da PI: 6.8053 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 90.7 | 1.1e-28 | 261 | 311 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl+ l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC4BG013280.7 261 EKHVSLKILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 311 799**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 615 aa Download sequence |
MLPLALAWIP VCPNSSLNVS AEYGDQAIKF GLRNKDVLCV QESACYINDM RMHDFLRACA 60 EHPLEKGQGV AGNAILSNHP FFSSDVREYD MHDYPLAHHA RKFGLHAAVA IRLRSTYTGN 120 DDYVLEFFLP LTCKVREEQQ LLLDDISMTM QRVCSSLRTV SDAELKENTT TMRSEIRCSS 180 SDVSISSCNQ IDVSSEVKIN VPLENQIKNS VEQLADKKYA KFEPGTTSQN FENCSSTGKN 240 VSLTLLQEST SDGLKIRSST EKHVSLKILQ QYFAGSLKDA AKSIGVCPTT LKRICRQHGI 300 SRWPSRKIKK VNRSLEKIQN VISTVHGVDG VIKYDPATGC IVSSVSHTEE PSMMNVEHRS 360 SDSLPTECRK FQPDYDAYKR EHLGQAVPHK AQNEKRSETH INLNPGGLSR NSHFGRTSKG 420 SECQDASNDS YLTKEMICPG GMEMWVEGAE QKNVLWNSIS MPQQCKIEIE TDKSNAIVEQ 480 SLASSSSMTD CSSGGTSSDG TLKKCLKSRP VDGSNASIVV KAAYKDDTVR LKLLPSMKYQ 540 DLLEEIAKRL KLSVGAFQLK YKDDEDEWVI LASDADLQEC LDVLDTTGAR IMKVQVRDVP 600 CATGASSGSS FISGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59580.1 | 2e-99 | Nin-like family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG013280.7 |