PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG013280.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 847aa MW: 93404.9 Da PI: 6.4342

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG013280.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.1	1.7e-28	493	543	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl+ l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC4BG013280.10 493 EKHVSLKILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 543 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 847 aa Download sequence
LPSFSVSPVQ QVTHISPSPP SVDAEEQGDV SITDGSDCSV SLASNEVMNV SAPTVPKTVY 60 GGVTLMERML RALAMLKEAS TAGPVLVQVW IPVRNGDHQV LTTSDQPFLL DERLTGYREV 120 SRQFTFSATE GPGLFPGLPG RVFISGMPEW TSNVMYYNTS EFLRVDYAIR NEVRGSLAMP 180 VFNSSGGSCC AVLEVVMTQE KDNFCSEMDN LSNALQSVHL STVRARTHPQ SLTRNQQSVL 240 TEILDVLRAV CHTHMLPLAL AWIPVCPNSS LNVSAEYGDQ AIKFGLRNKD VLCVQESACY 300 INDMRMHDFL RACAEHPLEK GQGVAGNAIL SNHPFFSSDV REYDMHDYPL AHHARKFGLH 360 AAVAIRLRST YTGNDDYVLE FFLPLTCKVR EEQQLLLDDI SMTMQRVCSS LRTVSDAELK 420 ENTTTMRSEI RCSSSDVSIS SCNQIDVSSE VKINVPLENQ IKNSVEQLAD KKYAKSLIKE 480 STSDGLKIRS STEKHVSLKI LQQYFAGSLK DAAKSIGVCP TTLKRICRQH GISRWPSRKI 540 KKVNRSLEKI QNVISTVHGV DGVIKYDPAT GCIVSSVSHT EEPSMMNVEH RSSDSLPTEC 600 RKFQPDYDAY KREHLGQAVP HKAQNEKRSE THINLNPGGL SRNSHFGRTS KGSECQDASN 660 DSYLTKEMIC PGGMEMWVEG AEQKNVLWNS ISMPQQCKIE IETDKSNAIV EQSLASSSSM 720 TDCSSGGTSS DGTLKKCLKS RPVDGSNASI VVKAAYKDDT VRLKLLPSMK YQDLLEEIAK 780 RLKLSVGAFQ LKYKDDEDEW VILASDADLQ ECLDVLDTTG ARIMKVQVRD VPCATGASSG 840 SSFISGQ

Sequence ? help Back to Top

Protein Sequence Length: 847 aa Download sequence

LPSFSVSPVQ QVTHISPSPP SVDAEEQGDV SITDGSDCSV SLASNEVMNV SAPTVPKTVY  60
GGVTLMERML RALAMLKEAS TAGPVLVQVW IPVRNGDHQV LTTSDQPFLL DERLTGYREV  120
SRQFTFSATE GPGLFPGLPG RVFISGMPEW TSNVMYYNTS EFLRVDYAIR NEVRGSLAMP  180
VFNSSGGSCC AVLEVVMTQE KDNFCSEMDN LSNALQSVHL STVRARTHPQ SLTRNQQSVL  240
TEILDVLRAV CHTHMLPLAL AWIPVCPNSS LNVSAEYGDQ AIKFGLRNKD VLCVQESACY  300
INDMRMHDFL RACAEHPLEK GQGVAGNAIL SNHPFFSSDV REYDMHDYPL AHHARKFGLH  360
AAVAIRLRST YTGNDDYVLE FFLPLTCKVR EEQQLLLDDI SMTMQRVCSS LRTVSDAELK  420
ENTTTMRSEI RCSSSDVSIS SCNQIDVSSE VKINVPLENQ IKNSVEQLAD KKYAKSLIKE  480
STSDGLKIRS STEKHVSLKI LQQYFAGSLK DAAKSIGVCP TTLKRICRQH GISRWPSRKI  540
KKVNRSLEKI QNVISTVHGV DGVIKYDPAT GCIVSSVSHT EEPSMMNVEH RSSDSLPTEC  600
RKFQPDYDAY KREHLGQAVP HKAQNEKRSE THINLNPGGL SRNSHFGRTS KGSECQDASN  660
DSYLTKEMIC PGGMEMWVEG AEQKNVLWNS ISMPQQCKIE IETDKSNAIV EQSLASSSSM  720
TDCSSGGTSS DGTLKKCLKS RPVDGSNASI VVKAAYKDDT VRLKLLPSMK YQDLLEEIAK  780
RLKLSVGAFQ LKYKDDEDEW VILASDADLQ ECLDVLDTTG ARIMKVQVRD VPCATGASSG  840
SSFISGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-173	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG013280.10