PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4BG013090.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | HB-other | ||||||||
Protein Properties | Length: 244aa MW: 27809.8 Da PI: 8.1577 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 53.9 | 3.1e-17 | 89 | 143 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rkR ++ + q++eLe++F+++++p+++ r L+kk+ ++ +Vk+WFqNrR +k TRIDC4BG013090.6 89 RKRGRHANRQIQELEAMFQQCPHPDENLRIALSKKVCMDPLRVKFWFQNRRNAKK 143 79999**********************************************8777 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 244 aa Download sequence |
SRLHSYRHIA IMFSSNVALA SKEENCPSKV AMVGEWQPQN GQVHDEIDLS IPVDDKDLIW 60 SNTGTMDDDE DVATADEGIT DAGSASHMRK RGRHANRQIQ ELEAMFQQCP HPDENLRIAL 120 SKKVCMDPLR VKFWFQNRRN AKKNQNERQQ NMVLRTENIM LEEENRAMKA AILKKTCPTC 180 KGPMVFFRPL TPELRRLHME NARLKAELLH RTAYLHGVSA GTAGSSRILC DLNVDPVMPL 240 PLRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G04890.1 | 2e-32 | HD-ZIP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4BG013090.6 |