PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG012560.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 312aa    MW: 33902.4 Da    PI: 4.5677
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG012560.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.44.1e-112392791055
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR++iN+++  L+ l+P+      +K++ +++Le+AveY+k Lq
  TRIDC4BG012560.4 239 RKRREKINERLKVLQNLVPNG-----TKVDISTMLEEAVEYVKFLQ 279
                       9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MESGGVIAEA GWDSLGLTSQ AEESEMMEQL LGTFPSNGEE EHQELPWSVQ ATHAYYAHCN  60
GSSNAYSSAS SNSVGSLILD VPSDYGGFYL GDSNGIGSCT AALDLNMVHE QGAAQFMDAI  120
FNPSYGNGDS SCDNLGDSSM NLLDSIDTSN KRKHQDQGKI ADQTSGRKYS RKADSKRTKK  180
AMQCEGDDGT TADTSKQSLS CCTSEIDSNA FQEPPVASKP KGKAQAGRQT TDPQSLYARK  240
RREKINERLK VLQNLVPNGT KVDISTMLEE AVEYVKFLQL QIKLLSSDEM WMYAPIAYNG  300
MNIGIDLNLS QH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1239244RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-47bHLH family protein