PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG011870.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 211aa    MW: 23536.1 Da    PI: 6.4018
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG011870.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.62.7e-15108198190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fY++YAk  GF v +++++k k+++e  +++++C k  ++++ k     + +r++ +  +tgC  + k++ +   +++vt+   eHnH+l 
  TRIDC4BG011870.1 108 EFYQTYAKFHGFAVNTEYHRKIKKTNEYNRAEMRCHKARRNKKGKGVapVVPKRKRGVILKTGCPVRCKLNVD-GTQYVVTDYFDEHNHKLI 198
                       6************************************9999988776788999************99999999.99**************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
KVNSGAGAST AGSSERTEDA VLQPATSHDA DNPESESEMA IIPAMPTSTP LNTSTGNTQA  60
DQTAADIEVN DETDDEAQGD EDDGQSEILV PQPPYVGQRF ESFEETKEFY QTYAKFHGFA  120
VNTEYHRKIK KTNEYNRAEM RCHKARRNKK GKGVAPVVPK RKRGVILKTG CPVRCKLNVD  180
GTQYVVTDYF DEHNHKLIKK FDLVKFLTAH R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.12e-07FAR1 family protein