PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG011290.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 508aa    MW: 56718.8 Da    PI: 8.2932
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG011290.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.22.6e-1221951797
                      E--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3 17 vlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                      ++p++   +h    ++ s t++l  ++gr ++v +  +   g+ v+++GW  Fv a++++e+D+++F ++g+s+f   +++f
  TRIDC4BG011290.5 21 RIPRELS-THlR--SRISDTIKLSAPNGRAYDVVV--TWEFGELVIRSGWDAFVTAHHIEENDTFLFIYHGNSNF--EIHIF 95
                      6787776.4424..45788****************..5556679***************************9999..66666 PP
2B339.69.7e-13186271998
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        + k + + +p + + +h +++++s  ++le ++g+ ++v+   +k+s+  +vl++ W  Fv an+++ +D ++F+   + +++l+v +++
  TRIDC4BG011290.5 186 VNVKDCSINIPLRLV-SHLKEEAGSAIIKLEAPDGNIYNVRA--SKHSEDqVVLQSDWDAFVAANHIQLNDLLIFHS--KGKTRLKVLALD 271
                       46678999******9.776678999*****************..7777777*************************3..356666776665 PP
3B3407.3e-134224991895
                       --HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEE CS
                B3  18 lpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvk 95 
                       ++ +f++e+     + +++tl+   ++ ++W  +l    k++r ++ +GW++F+ +n+L+ gD+++Fk+  +r ++  ++v+
  TRIDC4BG011290.5 422 FSLEFCREYasT-LPGRDQTLI-LELEDKEWHTTL--HIKGSRKIIYRGWSKFACDNNLQLGDICLFKMAeRRtRGLAMRVH 499
                       457899999742.344555666.55688*******..66666678999********************87344455555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    
THCLPAISFL VVRLSSSPLQ RIPRELSTHL RSRISDTIKL SAPNGRAYDV VVTWEFGELV  60
IRSGWDAFVT AHHIEENDTF LFIYHGNSNF EIHIFNSHGC EKMASCFQSP SEIFGIFPPS  120
EPCDHHVLNG QAAPNPRHVQ TQVEFDYTMS TGCHLTKSQD EKVVEIARKI RSEIPLYVAI  180
MKKLNVNVKD CSINIPLRLV SHLKEEAGSA IIKLEAPDGN IYNVRASKHS EDQVVLQSDW  240
DAFVAANHIQ LNDLLIFHSK GKTRLKVLAL DPSGCEKNSS CLDTKNFSKT GEGSVWITDA  300
RPCTVEIIDL TSSGDDRTER EDAGRSSGRR KQVPGSHAKA RKMASASSPS TKSGPDTHKL  360
KHPISNNDNL QGPYRPPYIL ARGITLTGCV EKKVQEKVQA IGSELPIYVA VMTKSCVSGN  420
LFSLEFCREY ASTLPGRDQT LILELEDKEW HTTLHIKGSR KIIYRGWSKF ACDNNLQLGD  480
ICLFKMAERR TRGLAMRVHI ICKSGVFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.14e-17B3 family protein