PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG011240.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 420aa MW: 46555.4 Da PI: 9.7042

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG011240.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.5	9e-17	98	188	1	90
EEEE-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlks.grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+ v++ps+v ++ + lv+pk +a eh ++s+t++l+ ++++W ++ +rk + + ++ + GW +Fv++ ++++gD+++F+++++ ++ TRIDC4BG011240.2 98 FVAVMKPSYVKSQtSALVIPKGYAVEHFP--PKSQTVILQRpGKSKKWHPRFHIRKDKHGsILCGPGWLDFVRDTRVQVGDICIFERMKKGNG 188 78899***999888*******84..4778995566***77555544499*********************8876433 PP
2	B3	55.4	1.1e-17	323	416	7	99
.-HHHHT..T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 7 psdvlks..grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 +s+v+ + +++ +k+a+e+ +++ +t+tl e++++Wevk+ + + g +l++GW+eF+++n+Lk +D+++F+l+ + ++ +++v TRIDC4BG011240.2 323 KSSVGDNslYAVTICRKYAAEYL--PAGAQTVTLLRaEKSKTWEVKV--NPRIGDaKMLRGGWREFAHDNHLKLKDICLFQLMTDqRKLTMMV 411 566666623346999**9993..334457777665999***..555444489*********************888*** PP EEE-S CS B3 95 kvfrk 99 ++r+ TRIDC4BG011240.2 412 DIIRH 416 997 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
SAEEDPENEN TDTIYSSSQD LGEDTEPANT DIEYSSSGDS GEGTEDIPSE YESSFELDDG 60 HTPSGHDYVL ARGSTLSGVQ DEKVTTLIQD VGAEVPVFVA VMKPSYVKSQ TSALVIPKGY 120 AVEHFPPKSQ TVILQRPGKS KKWHPRFHIR KDKHGSILCG PGWLDFVRDT RVQVGDICIF 180 ERMKKGNGRT FSSLRVHLLR ESMLHSSASG TGPKRVSSTH GKTRVNSATP KRARITGGRT 240 RAKATSTTCV RKEPGGNAPS SVRSHGHEAR QGPVESNKSR GPRKRPYIIS STACLTREQE 300 MNVDKRARSL QSDVPIYASV MNKSSVGDNS LYAVTICRKY AAEYLPAGAQ TVTLLRAEKS 360 KTWEVKVNPR IGDAKMLRGG WREFAHDNHL KLKDICLFQL MTDQRKLTMM VDIIRHNEKR

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

SAEEDPENEN TDTIYSSSQD LGEDTEPANT DIEYSSSGDS GEGTEDIPSE YESSFELDDG  60
HTPSGHDYVL ARGSTLSGVQ DEKVTTLIQD VGAEVPVFVA VMKPSYVKSQ TSALVIPKGY  120
AVEHFPPKSQ TVILQRPGKS KKWHPRFHIR KDKHGSILCG PGWLDFVRDT RVQVGDICIF  180
ERMKKGNGRT FSSLRVHLLR ESMLHSSASG TGPKRVSSTH GKTRVNSATP KRARITGGRT  240
RAKATSTTCV RKEPGGNAPS SVRSHGHEAR QGPVESNKSR GPRKRPYIIS STACLTREQE  300
MNVDKRARSL QSDVPIYASV MNKSSVGDNS LYAVTICRKY AAEYLPAGAQ TVTLLRAEKS  360
KTWEVKVNPR IGDAKMLRGG WREFAHDNHL KLKDICLFQL MTDQRKLTMM VDIIRHNEKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31680.1	4e-08	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG011240.2