PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG011240.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 601aa    MW: 67314.8 Da    PI: 9.0383
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG011240.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.61.7e-16311081396
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                       ++ +++pkkf++++ggk   s+t+ le+++g+ + +++  +k+ g +v+ +GW+ F ++++++e+D+++F+++++s+fe  v v
  TRIDC4BG011240.1  31 RHGMIIPKKFIDNFGGK--ISRTIELESSNGNMYVFEV--SKHMGNTVIHRGWQAFIDEHHIEENDSLLFRHIEKSRFE--VLV 108
                       567********999998..888****************..********************************9989995..444 PP
2B351.61.7e-16279369190
                       EEEE-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                B3   1 ffkvltpsdvlks.grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                       f+ v++ps+v ++ + lv+pk +a eh    ++s+t++l+   ++++W  ++ +rk + + ++ + GW +Fv++ ++++gD+++F+++++ ++
  TRIDC4BG011240.1 279 FVAVMKPSYVKSQtSALVIPKGYAVEHFP--PKSQTVILQRpGKSKKWHPRFHIRKDKHGsILCGPGWLDFVRDTRVQVGDICIFERMKKGNG 369
                       788999****999888***********84..47789****95566*******77555544499***********************8876443 PP
3B354.61.9e-17504597799
                       .-HHHHT..T-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                B3   7 psdvlks..grlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                       +s+v+ +    +++ +k+a+e+   +++ +t+tl   e++++Wevk+  + + g   +l++GW+eF+++n+Lk +D+++F+l+ + ++ +++v
  TRIDC4BG011240.1 504 KSSVGDNslYAVTICRKYAAEYL--PAGAQTVTLLRaEKSKTWEVKV--NPRIGDaKMLRGGWREFAHDNHLKLKDICLFQLMTDqRKLTMMV 592
                       566666523346999****9993..334457777665999*******..555444489*************************888******* PP

                       EEE-S CS
                B3  95 kvfrk 99 
                        ++r+
  TRIDC4BG011240.1 593 DIIRH 597
                       **997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 601 aa     Download sequence    
MEKLCDCCKR YADHLDEKMK CFRRHMGADF RHGMIIPKKF IDNFGGKISR TIELESSNGN  60
MYVFEVSKHM GNTVIHRGWQ AFIDEHHIEE NDSLLFRHIE KSRFEVLVLD SDDCEKVFFC  120
PGINIVSNVE ERGADSVNIS NSSRDYATRS PGSKRFATQG RGNSSYPRKA AKTALNYSSP  180
EDSEEDPENE NTDTIYSSSQ DLGEDTEPAN TDIEYSSSGD SGEGTEDIPS EYESSFELDD  240
GHTPSGHDYV LARGSTLSGV QDEKVTTLIQ DVGAEVPVFV AVMKPSYVKS QTSALVIPKG  300
YAVEHFPPKS QTVILQRPGK SKKWHPRFHI RKDKHGSILC GPGWLDFVRD TRVQVGDICI  360
FERMKKGNGR TFSSLRVHLL RESMLHSSAS GTGPKRVSST HGKTRVNSAT PKRARITGGR  420
TRAKATSTTC VRKEPGGNAP SSVRSHGHEA RQGPVESNKS RGPRKRPYII SSTACLTREQ  480
EMNVDKRARS LQSDVPIYAS VMNKSSVGDN SLYAVTICRK YAAEYLPAGA QTVTLLRAEK  540
SKTWEVKVNP RIGDAKMLRG GWREFAHDNH LKLKDICLFQ LMTDQRKLTM MVDIIRHNEK  600
R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.14e-11B3 family protein