PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG011230.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 355aa    MW: 40524.6 Da    PI: 8.9403
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG011230.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B363.72.8e-20531331298
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        ++r+++p kf++++  +   ++t++le+++g++++v +  +    + vl++GW+eFv+a+g+  gDf+vF +dg+s f  +v +f+
  TRIDC4BG011230.3  53 FRDRMIIPDKFVQKFRRQ--ITRTVKLESRNGNTFDVHV--TEDLHKLVLQSGWEEFVSAHGISMGDFLVFNYDGNSWF--KVLIFE 133
                       4678***********866..6679***************..999999********************************..888876 PP
2B346.95.1e-152743541599
                       -EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  15 rlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        l + +++ae +       e+ + ++  ++g+ W+v++++++++++ +l+ GW++Fv  n+L+ gD+++Fkl ++++ ++ v ++rk
  TRIDC4BG011230.3 274 TLEICREYAEVYlpF----ED-ETIVLRRHGKIWKVRCCISQYGSKRLLK-GWRQFVCGNNLRLGDICLFKLLKNKKYTMDVYIIRK 354
                       577888888777432....22.4555677*********997777665565.**********************99***9****9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
DGLLTDRPPT SLEGMYKSST GCKMSSPWSK RGDIAAAANE QDNHFFKVMI GDFRDRMIIP  60
DKFVQKFRRQ ITRTVKLESR NGNTFDVHVT EDLHKLVLQS GWEEFVSAHG ISMGDFLVFN  120
YDGNSWFKVL IFEPSGCERL SSSFLPMETA PYEGQEWGEK LTGTLSMRHD LPMIRSPQSE  180
RGTMIVQWDN SNHGENIMVL GSSSAPSSES SGCISSSEDD LQAHPARRLI LLRGTCPTGS  240
QKKKLKVKIR DIYSEIPIVG CTIRKSSIHG KPYTLEICRE YAEVYLPFED ETIVLRRHGK  300
IWKVRCCISQ YGSKRLLKGW RQFVCGNNLR LGDICLFKLL KNKKYTMDVY IIRKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-23B3 family protein