PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG010100.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 100aa MW: 10843.5 Da PI: 8.5145 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 53.1 | 4.4e-17 | 18 | 54 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nCg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ TRIDC4BG010100.7 18 CQNCGVSSrlTPAMRRGPAGPRTLCNACGLMWANKGT 54 **********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence |
VSLQSMARMI ISENPSDCQN CGVSSRLTPA MRRGPAGPRT LCNACGLMWA NKGTLRSPLN 60 APKMTVQHPV NPSKMESVDD DKAIVCAERN HTAVKMDSEM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51600.2 | 2e-20 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG010100.7 |