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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC4BG010100.7 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | GATA | ||||||||
| Protein Properties | Length: 100aa MW: 10843.5 Da PI: 8.5145 | ||||||||
| Description | GATA family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GATA | 53.1 | 4.4e-17 | 18 | 54 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C+nCg+++ Tp +Rrgp g++tLCnaCGl+++ kg+
TRIDC4BG010100.7 18 CQNCGVSSrlTPAMRRGPAGPRTLCNACGLMWANKGT 54
**********************************997 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 100 aa Download sequence |
VSLQSMARMI ISENPSDCQN CGVSSRLTPA MRRGPAGPRT LCNACGLMWA NKGTLRSPLN 60 APKMTVQHPV NPSKMESVDD DKAIVCAERN HTAVKMDSEM |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G51600.2 | 2e-20 | GATA family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC4BG010100.7 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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