PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG010100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 197aa MW: 21324.7 Da PI: 10.3238 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 51.3 | 1.6e-16 | 138 | 174 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nCg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ TRIDC4BG010100.1 138 CQNCGVSSrlTPAMRRGPAGPRTLCNACGLMWANKGT 174 **********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
ADALLSAASE QLTLVYQGEV YVFDPVPPQK VQAALLVLGG CEVPPGLVSM AGPTAYAEKS 60 TTVAAKRVAS LMRFREKRKE RCFDKKIRYG VRKEVAQKMK RRKGQFAGRA DFGDAASSSA 120 ACVSAVDGED DHFRESHCQN CGVSSRLTPA MRRGPAGPRT LCNACGLMWA NKGTLRSPLN 180 APKMTVQHPV NPSKMVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51600.2 | 1e-51 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG010100.1 |