PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG009100.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 316aa    MW: 34983.3 Da    PI: 6.7973
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG009100.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.91.2e-10147195355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC4BG009100.4 147 NSHSLAERLRRKKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 195
                       58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MYSGQQSDQG PAANSGKEFL EGNWGSVAMH QKMGYDSAAY GFQAYGMELE ERPGTFSQNI  60
QMSDEHSGGM KKRKGTDECI ALLNPSASSK NVGDQQTKVS SQPERNSAER DNRKISPKTQ  120
SKEDSSDGDG TRENYVHFRA KRGQATNSHS LAERLRRKKI SERMKLLQDL VPGCNKITGK  180
AVMLDEIINY VQSLQRQVEF LSMKLATVNP ELGFDIEQIL SKQVMLSQDR RLGFYGADPG  240
SSALIAHFNQ GMMHPDMMCN ASNPAGALHG TIHDISMMNQ MPEMWETLQN IPHMNFNPAV  300
AADSSTNNAG PMKIEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-55bHLH family protein