PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG008460.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 568aa    MW: 61051.8 Da    PI: 4.6343
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG008460.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3529.4e-1081995683374
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                       + Ll+c +a ++ + +la+a La+++  a+++gdp +R+a+yf  ALa+rla    + +++l++ ++++  s+e++  +k++++++P+ kf+h
  TRIDC4BG008460.2 199 QSLLACSRAAAA-NPALATAELAKVRAAATESGDPAERVAFYFSDALARRLAC---GGAASLETASDARLASDEVTLCYKTLNDACPYSKFAH 287
                       7899**998776.999************************************9...5566677777777779********************* PP

              GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       ltaNqaIlea+  ++++Hi+Df+i qG+QW+aLlqaLa+Rpeg+p ++Ri gv sp  g   + +l +t  rL++fA+ lgv+fef + + + 
  TRIDC4BG008460.2 288 LTANQAILEATGAATKIHIVDFGIVQGIQWAALLQALATRPEGKPsRIRISGVPSPYLGpqPAASLAATSARLRDFAQLLGVDFEFVP-LLRP 379
                       *****************************************887769********998898999************************.599* PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +++l+ ++++v+p+E++aVn++lql++ll   ++++++ ++vL+l ksl P vv++ e e+++n++ F++rf++al+yy a+f+sl++ ++r+
  TRIDC4BG008460.2 380 VHELDQSDFSVDPDEVVAVNFMLQLYHLL---GDSDEPVRRVLRLAKSLGPAVVTLGEYEVSLNRAGFVDRFASALSYYRAVFESLDVAMARD 469
                       *****************************...66666777***************************************************** PP

              GRAS 279 seerikvErellgreivnvva.cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLv 368
                       se+r+++Er ++g++i+ +v   ega+r+ r+   ++W++ +e +GF+pv+ls++a++qa+lll  ++ +  y++ e   +++ l W++rpL+
  TRIDC4BG008460.2 470 SEDRATLERCMFGERIRRAVGpPEGADRTDRMAGSAEWQALMEWCGFEPVRLSNYAESQAELLLWDYDsKYKYSLVELPPAFLsLAWEKRPLL 562
                       ********************83699*******************************************7778999999999988********* PP

              GRAS 369 svSaWr 374
                       +vSaWr
  TRIDC4BG008460.2 563 TVSAWR 568
                       *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    
GERPRRPRDS PTPQIGRAEE GMAYMCADSG NLMAIAQQVI QQQQQHNQQQ QRHHHHHLVP  60
SPMPMPAAPV PPHAQIPGSL PFGAAGSAAW PQAENFFSDV FGASAADAVF SDLAAGTDFD  120
SDVWMESLIG DAPVFQDSDL DRLIFTTPPP PVAPPAEAED AAPQVENAPA SLPTVAAAAQ  180
AACSSPGSAD ASCSAPILQS LLACSRAAAA NPALATAELA KVRAAATESG DPAERVAFYF  240
SDALARRLAC GGAASLETAS DARLASDEVT LCYKTLNDAC PYSKFAHLTA NQAILEATGA  300
ATKIHIVDFG IVQGIQWAAL LQALATRPEG KPSRIRISGV PSPYLGPQPA ASLAATSARL  360
RDFAQLLGVD FEFVPLLRPV HELDQSDFSV DPDEVVAVNF MLQLYHLLGD SDEPVRRVLR  420
LAKSLGPAVV TLGEYEVSLN RAGFVDRFAS ALSYYRAVFE SLDVAMARDS EDRATLERCM  480
FGERIRRAVG PPEGADRTDR MAGSAEWQAL MEWCGFEPVR LSNYAESQAE LLLWDYDSKY  540
KYSLVELPPA FLSLAWEKRP LLTVSAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-129GRAS family protein