PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG008460.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 298aa    MW: 33187.9 Da    PI: 5.0646
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG008460.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS309.29.7e-95329881374
              GRAS  81 lklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAe 170
                       +k++++++P+ kf+hltaNqaIlea+  ++++Hi+Df+i qG+QW+aLlqaLa+Rpeg+p ++Ri gv sp  g   + +l +t  rL++fA+
  TRIDC4BG008460.1   3 YKTLNDACPYSKFAHLTANQAILEATGAATKIHIVDFGIVQGIQWAALLQALATRPEGKPsRIRISGVPSPYLGpqPAASLAATSARLRDFAQ 95 
                       799*****************************************************887769********998898999************** PP

              GRAS 171 elgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
                        lgv+fef + + + +++l+ ++++v+p+E++aVn++lql++ll   ++++++ ++vL+l ksl P vv++ e e+++n++ F++rf++al+y
  TRIDC4BG008460.1  96 LLGVDFEFVP-LLRPVHELDQSDFSVDPDEVVAVNFMLQLYHLL---GDSDEPVRRVLRLAKSLGPAVVTLGEYEVSLNRAGFVDRFASALSY 184
                       **********.599******************************...66666777************************************** PP

              GRAS 264 ysalfdsleaklpreseerikvErellgreivnvva.cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee 354
                       y a+f+sl++ ++r+se+r+++Er ++g++i+ +v   ega+r+ r+   ++W++ +e +GF+pv+ls++a++qa+lll  ++ +  y++ e 
  TRIDC4BG008460.1 185 YRAVFESLDVAMARDSEDRATLERCMFGERIRRAVGpPEGADRTDRMAGSAEWQALMEWCGFEPVRLSNYAESQAELLLWDYDsKYKYSLVEL 277
                       ***********************************83699*******************************************7778999999 PP

              GRAS 355 sgslv.lgWkdrpLvsvSaWr 374
                         +++ l W++rpL++vSaWr
  TRIDC4BG008460.1 278 PPAFLsLAWEKRPLLTVSAWR 298
                       999988**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
LCYKTLNDAC PYSKFAHLTA NQAILEATGA ATKIHIVDFG IVQGIQWAAL LQALATRPEG  60
KPSRIRISGV PSPYLGPQPA ASLAATSARL RDFAQLLGVD FEFVPLLRPV HELDQSDFSV  120
DPDEVVAVNF MLQLYHLLGD SDEPVRRVLR LAKSLGPAVV TLGEYEVSLN RAGFVDRFAS  180
ALSYYRAVFE SLDVAMARDS EDRATLERCM FGERIRRAVG PPEGADRTDR MAGSAEWQAL  240
MEWCGFEPVR LSNYAESQAE LLLWDYDSKY KYSLVELPPA FLSLAWEKRP LLTVSAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-125GRAS family protein