PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG006760.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 621aa    MW: 65142.1 Da    PI: 4.7485
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG006760.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS463.99.3e-1422336171374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl...fsevsPi 90 
                       lv++Ll+cAeav+++++++a+al++++  la+++g +m+++aayf eALa+r++r        ++p+++s  +  ++++a+ l   f+e +P+
  TRIDC4BG006760.2 233 LVHALLACAEAVQQENFSAAEALVKQIPLLAASQGGAMRKVAAYFGEALARRVFR--------FRPQPDS--SLLDAAFADLLhahFYESCPY 315
                       689****************************************************........5555555..34444444444456******* PP

              GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                       lkf+h+taNqaIlea++g++rvH++Df+i+qG+QWpaLlqaLa Rp+gpps+R+Tgvg+p+++++++l+++g++La+fA++++v+f+++ lva
  TRIDC4BG006760.2 316 LKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVA 408
                       ********************************************************************************************* PP

              GRAS 184 krledleleeLrvkp.......gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269
                        +l+dle+ +L+ +         E++aVn+v+++hrll+++++le+    vL +v+ ++P++v+vveqea+hns++Fl+rf+e+l+yys++fd
  TRIDC4BG006760.2 409 ATLADLEPFMLQPEGeedpneePEVIAVNSVFEMHRLLAQPGALEK----VLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFD 497
                       ***********544444557789***********************....******************************************* PP

              GRAS 270 sleak..............lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sd 347
                       sle +              +p+++ +++++++++lgr+i+nvvacegaer+erhetl++Wr+rl++aGF++v+l+++a+kqa++ll+ ++ +d
  TRIDC4BG006760.2 498 SLEGGssggpsevssgaaaAPAAAGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAgGD 590
                       **98889**********9999999********************************************************************* PP

              GRAS 348 gyrveeesgslvlgWkdrpLvsvSaWr 374
                       gy+vee++g+l+lgW++rpL+++SaWr
  TRIDC4BG006760.2 591 GYKVEEKEGCLTLGWHTRPLIATSAWR 617
                       **************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 621 aa     Download sequence    
MKREYQDAGG SGGGGGGMGS SEDKMMVSGS AAAGEGEEVD ELLAALGYKV RASDMADVAQ  60
KLEQLEMAMG MGGVGAGAAP DDSFATHLAT DTVHYNPTDL SSWVESMLSE LNAPPPPLPP  120
APQLNASTSS TVTGGGYFDL PPSVDSSCST YALRPIPSPA VAPADLSADS VARDPKRMRT  180
GGSSTSSSSS SSSLGGGGAR SSVVEAAPPV AAAAGAPALP VVVVDTQEAG IRLVHALLAC  240
AEAVQQENFS AAEALVKQIP LLAASQGGAM RKVAAYFGEA LARRVFRFRP QPDSSLLDAA  300
FADLLHAHFY ESCPYLKFAH FTANQAILEA FAGCRRVHVV DFGIKQGMQW PALLQALALR  360
PGGPPSFRLT GVGPPQPDET DALQQVGWKL AQFAHTIRVD FQYRGLVAAT LADLEPFMLQ  420
PEGEEDPNEE PEVIAVNSVF EMHRLLAQPG ALEKVLGTVR AVRPRIVTVV EQEANHNSGT  480
FLDRFTESLH YYSTMFDSLE GGSSGGPSEV SSGAAAAPAA AGTDQVMSEV YLGRQICNVV  540
ACEGAERTER HETLGQWRNR LGNAGFETVH LGSNAYKQAS TLLALFAGGD GYKVEEKEGC  600
LTLGWHTRPL IATSAWRLAA P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein