PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG006430.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 118aa    MW: 13572.7 Da    PI: 9.8197
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG006430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR146.41.3e-1436115190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       ++Yn Y+ e+GF vr  ks+ + + +   +++ vC ++g +++++++         + r+ C a +++ ++kd+ w+++++   HnH+l+
  TRIDC4BG006430.1  36 DYYNLYSWEIGFGVRYGKSRLNVKRT-KCMQEIVCGCSGIPKKSNTR---------TCRCRCPALIRLLRSKDNGWYISEFIPSHNHSLM 115
                       69****************99995554.67899********9987655.........89******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MSALEKALRR YAEKKTDTVI VPAVGSTSHS LREAYDYYNL YSWEIGFGVR YGKSRLNVKR  60
TKCMQEIVCG CSGIPKKSNT RTCRCRCPAL IRLLRSKDNG WYISEFIPSH NHSLMEKC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.17e-12FAR1 family protein