PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG005160.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 245aa    MW: 28348.1 Da    PI: 8.7002
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG005160.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1371.1e-111897190
               FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                       +fYn Y+ e GF +r  ks+ + + +    ++ vC + gk+  e+++         + r++C a + + ++kd+ w++++ +  HnH+l+
  TRIDC4BG005160.11 18 DFYNLYSWEKGFGIRYGKSRLNVNRT-KCIQEIVCGCAGKPIVENTR---------SCRCECPALVILLRSKDNGWYIAEHRDGHNHSLS 97
                       6*****************99995555.566789******99886555.........99******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MIKPKIGTTF DSLGEAYDFY NLYSWEKGFG IRYGKSRLNV NRTKCIQEIV CGCAGKPIVE  60
NTRSCRCECP ALVILLRSKD NGWYIAEHRD GHNHSLSQTY DQTIHWPSHK HINVYSMDLV  120
KQLRQNNVNL AKVYNIIGSS FGKMENVSFT KRALRTLCGK ISREQSEDDV RKTMEVFQEL  180
CSKDQQFTYR VQADNEGRIS NLMWATGNSR LQYNFFGDVV TFDTTYRTNL YDIPFGLFVG  240
VNNHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.14e-27FAR1 family protein