PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG005070.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 412aa MW: 45932.1 Da PI: 10.674

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG005070.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.8	2.4e-10	189	269	12	99
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++++++p + ++ g+ s t++le ++g + + + ++k g+ vl++GW +Fv ++++e+ ++ F + g+s+f +v++f++ TRIDC4BG005070.5 189 FRHNMCIPQEVGNHLGS--MISETIKLEAPNG-IFHIGV--CRKTGELVLQSGWDKFVAMHHIEENYSFWFVYRGNSTF--KVRIFNS 269 45679*999955554..47889*998.688899..9999**************************999999..9999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
GSNLLRSHGT TQCSGAPPPA SLLRLRPATP RRPRSGAPPP PSPASTPYKI CERRRRQWRP 60 RVSAPPPAPP RRRRWGQIRL LHPSPIYGSR RPPPAALNRA SRRPGAPRVP PPTSPVHEPG 120 RPQISRTSVH YPPQAAAPLP RLSTRSEWRR LQEERRSARE SCTMWWQHYL LNHVGDDKTH 180 FVAMATGGFR HNMCIPQEVG NHLGSMISET IKLEAPNGIF HIGVCRKTGE LVLQSGWDKF 240 VAMHHIEENY SFWFVYRGNS TFKVRIFNSN DHEMTTSCSQ PPQSFGGVPS AATCDHHVLN 300 GYEAHMLNER ASVEFGVDLE PHSSGNLEGP SQHSYILAAG ITLGAVETKK VEEKVQAIQS 360 ALPIFVTVMT KTWVNGRNLF KIYSTYEERK ASHAPGRGKN DGVASQIGNR CD

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

GSNLLRSHGT TQCSGAPPPA SLLRLRPATP RRPRSGAPPP PSPASTPYKI CERRRRQWRP  60
RVSAPPPAPP RRRRWGQIRL LHPSPIYGSR RPPPAALNRA SRRPGAPRVP PPTSPVHEPG  120
RPQISRTSVH YPPQAAAPLP RLSTRSEWRR LQEERRSARE SCTMWWQHYL LNHVGDDKTH  180
FVAMATGGFR HNMCIPQEVG NHLGSMISET IKLEAPNGIF HIGVCRKTGE LVLQSGWDKF  240
VAMHHIEENY SFWFVYRGNS TFKVRIFNSN DHEMTTSCSQ PPQSFGGVPS AATCDHHVLN  300
GYEAHMLNER ASVEFGVDLE PHSSGNLEGP SQHSYILAAG ITLGAVETKK VEEKVQAIQS  360
ALPIFVTVMT KTWVNGRNLF KIYSTYEERK ASHAPGRGKN DGVASQIGNR CD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	53	74	RRRRQWRPRVSAPPPAPPRRRR
2	54	75	RRRRQWRPRVSAPPPAPPRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	2e-12	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG005070.5