PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG005070.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 347aa    MW: 39651.2 Da    PI: 8.3132
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG005070.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.31.8e-10681481299
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        ++++++p +  ++ g+    s t++le ++g  + + +  ++k g+ vl++GW +Fv  ++++e+ ++ F + g+s+f  +v++f++
  TRIDC4BG005070.4  68 FRHNMCIPQEVGNHLGS--MISETIKLEAPNG-IFHIGV--CRKTGELVLQSGWDKFVAMHHIEENYSFWFVYRGNSTF--KVRIFNS 148
                       45679***999955554..47889*****998.688899..9999****************************999999..9999875 PP
2B341.81.9e-132443431100
                       EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.s 88 
                       f++v+t+  v+ ++ l++ +++ +++      +++k l+l+ e    +W  +l       r  ++++GWkeFv  n+++egD+++F++ ++ +
  TRIDC4BG005070.4 244 FVTVMTKTWVNGRN-LRFCREYSSRYipP--MRKGKPLMLQAEGRtTEWPARL--GIDATRvNWIRRGWKEFVAGNDVREGDICLFERAKStT 331
                       67788888888887.88888888888553..44566688888544499*****..444444489***********************998879 PP

                       EE..EEEEE-SS CS
                B3  89 efelvvkvfrks 100
                       + +++v+++rks
  TRIDC4BG005070.4 332 RLRMTVHFLRKS 343
                       999999999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MGGIPEIASV FLIHWHNLWS LSSRSEWRRL QEERRSARES CTMWWQHYLL NHVGDDKTHF  60
VAMATGGFRH NMCIPQEVGN HLGSMISETI KLEAPNGIFH IGVCRKTGEL VLQSGWDKFV  120
AMHHIEENYS FWFVYRGNST FKVRIFNSND HEMTTSCSQP PQSFGGVPSA ATCDHHVLNG  180
YEAHMLNERA SVEFGVDLEP HSSGNLEGPS QHSYILAAGI TLGAVETKKV EEKVQAIQSA  240
LPIFVTVMTK TWVNGRNLRF CREYSSRYIP PMRKGKPLML QAEGRTTEWP ARLGIDATRV  300
NWIRRGWKEF VAGNDVREGD ICLFERAKST TRLRMTVHFL RKSDMEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-19B3 family protein