PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4BG004770.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 680aa MW: 74371.9 Da PI: 7.1662

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG004770.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.6	3.8e-16	445	483	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+C+CkkskClk+YCeCfaag++Cse C+C++C Nk TRIDC4BG004770.7 445 SCKRCSCKKSKCLKLYCECFAAGVYCSEPCSCQGCLNKP 483 689**********************************96 PP
2	TCR	49.5	8.5e-16	530	569	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeC++ g+ Cs++C+Ce CkN+ TRIDC4BG004770.7 530 RHKRGCNCKKSSCLKKYCECYQGGVGCSNNCRCETCKNTF 569 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
SSPPTPGTAS KRTISRSTPP PFPQSSRPRI TTRTRRDQSS PRSSFGDYTE NEISMEDGTD 60 KNKSPTSSTA VRLFACTSTI TRESHTMITC SVNEGIVDPP KEPNDLPQPG RFDSGSPDHN 120 TAPCHGVSVR SDLKQDKCPK LEAVQATNNT VEKRKCLFSS DMQPQDGCQP AKENNEVMGC 180 EWEDLVSVTS GELLAFDSSM DQHHTGVQLA VNNAESCGYL LSKLAGGADI PDRTHPTTSS 240 QAYYHEMVVG EDKTENGQLF PEDKKTILSE EIQDNINEEN ACIPLGCKVE TQQRGVRRRC 300 LVFEASGYSH RTVQKEYVGD LSFSTSKGKS SAQNHRNPGK TPSPHVFRGI GLHLNALALT 360 SKDKMACQDP LATALVPSLK TEQDVHGNLL SAGGNFVHSG SGSLDLQMDN DDCSVGGFLG 420 NDHNSSQSSS PPKKRRKSDN GDDDSCKRCS CKKSKCLKLY CECFAAGVYC SEPCSCQGCL 480 NKPIHEEIVL STRKQIEFRN PLAFAPKVIR MSEAGQETQE DPKNTPASAR HKRGCNCKKS 540 SCLKKYCECY QGGVGCSNNC RCETCKNTFG TRDAENEEMK QEGDQTENRE QEKENDQQKA 600 NVHSEDHKLV ELVVPITPPL DVSSPVVCSN SQTSQMQSHL DHAKPAAGVP PGPQKPLKQF 660 SLARPRRPVT ACSSRKCLVF

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

SSPPTPGTAS KRTISRSTPP PFPQSSRPRI TTRTRRDQSS PRSSFGDYTE NEISMEDGTD  60
KNKSPTSSTA VRLFACTSTI TRESHTMITC SVNEGIVDPP KEPNDLPQPG RFDSGSPDHN  120
TAPCHGVSVR SDLKQDKCPK LEAVQATNNT VEKRKCLFSS DMQPQDGCQP AKENNEVMGC  180
EWEDLVSVTS GELLAFDSSM DQHHTGVQLA VNNAESCGYL LSKLAGGADI PDRTHPTTSS  240
QAYYHEMVVG EDKTENGQLF PEDKKTILSE EIQDNINEEN ACIPLGCKVE TQQRGVRRRC  300
LVFEASGYSH RTVQKEYVGD LSFSTSKGKS SAQNHRNPGK TPSPHVFRGI GLHLNALALT  360
SKDKMACQDP LATALVPSLK TEQDVHGNLL SAGGNFVHSG SGSLDLQMDN DDCSVGGFLG  420
NDHNSSQSSS PPKKRRKSDN GDDDSCKRCS CKKSKCLKLY CECFAAGVYC SEPCSCQGCL  480
NKPIHEEIVL STRKQIEFRN PLAFAPKVIR MSEAGQETQE DPKNTPASAR HKRGCNCKKS  540
SCLKKYCECY QGGVGCSNNC RCETCKNTFG TRDAENEEMK QEGDQTENRE QEKENDQQKA  600
NVHSEDHKLV ELVVPITPPL DVSSPVVCSN SQTSQMQSHL DHAKPAAGVP PGPQKPLKQF  660
SLARPRRPVT ACSSRKCLVF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	432	438	PKKRRKS
2	433	437	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-66	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG004770.7