PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG004620.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 261aa    MW: 28063.9 Da    PI: 8.9387
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG004620.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.66.2e-17152188135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C+nCgt++  Tp +Rrgp g++tLCnaCGl+++ kg+
  TRIDC4BG004620.3 152 CQNCGTSEkmTPAMRRGPAGPRTLCNACGLMWANKGT 188
                       **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
SPAAPEPVSA FPGNPNQLTL LFQGEVYVFE SVTPDKVQAV LLLLGTGEIP PGLSAMVLPS  60
QRENRGYEDL LQRTDIPAKR VASLIRFREK RKGRNFDKQI RYAVRKEVAH RMQRRKGQFV  120
GRANLEGESP SPGCDPVSQG SGQDFLSRES KCQNCGTSEK MTPAMRRGPA GPRTLCNACG  180
LMWANKGTLR SCSKAKVEAP MLAIEQCNTA VAQCQTGTDV KALPAPNNYD VAPSNGEAMD  240
NSVTANATAA AMEGAPKAQS E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-68GATA family protein