PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG004620.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 196aa    MW: 22260 Da    PI: 9.2465
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG004620.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.24e-17118154135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C+nCgt++  Tp +Rrgp g++tLCnaCGl+++ kg+
  TRIDC4BG004620.1 118 CQNCGTSEkmTPAMRRGPAGPRTLCNACGLMWANKGT 154
                       **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MRIYFRGQTF LQKGLLHSSG SAKNARGEIL ISKYAMLYAK KWHTGCSVGR GNLLEERIWR  60
GSPLLQAVIL SPRAQAKISC LENQSCLIFD HLIHFFCRYV IERERDDPFS PYHTCYRCQN  120
CGTSEKMTPA MRRGPAGPRT LCNACGLMWA NKGTLRSCSK AKVEAPMLAI EQVRFFIITI  180
DHPLGDRCFL CIPNEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.13e-20GATA family protein