PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG003560.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 222aa    MW: 24124.5 Da    PI: 7.6368
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG003560.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.51.3e-141561455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       h ++Er+RR++iN++f eL +++P +     kK++Ka+iL  A++++k+Lq
  TRIDC4BG003560.2 15 DHIMAERKRREKINQRFIELSTVIPGL-----KKMDKATILSDATRHVKELQ 61
                      699************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
TGTGPVSSGP PYAQDHIMAE RKRREKINQR FIELSTVIPG LKKMDKATIL SDATRHVKEL  60
QEKIKALEAA TGRSNRSNET VVLIKKKPRH ADAAVSDQNQ NGSPSSASSG APASKNPLPE  120
IEVRFSETGV MVRILCHDVK GVVVRVLSEV EEGLHLTVTH TNVMPFTACT VIITITAKGI  180
SYGLYGRADM VDEGFTVTAE EIVGRLNYVL ELHSSCTSTE EN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12025ERKRRE
22126RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-40bHLH family protein