PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG003350.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 334aa    MW: 36617.8 Da    PI: 6.7914
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG003350.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix58.81.4e-1835117284
          trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                       Wt  e+++Liea+++++++   + l  ++W++v +++++ g++rs++qC+++w+nl ++ykk+++  +   ++++   p + +
  TRIDC4BG003350.2  35 WTLPETMLLIEAKKRVHSERHPADLGLGRWRWVEDYCWRAGCRRSQNQCNDRWDNLMRDYKKVRAYGEHAGAGAEAPRPSYWE 117
                       ***************************************************************98766654555555555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MDAKGSGGAH REGEETGNVM AGAMTVAREY RRGNWTLPET MLLIEAKKRV HSERHPADLG  60
LGRWRWVEDY CWRAGCRRSQ NQCNDRWDNL MRDYKKVRAY GEHAGAGAEA PRPSYWEMAR  120
AERKARYLPS NLLREIYEAM AEIVERRTGF SGAGGPFLGA PPPPMASTGL VGVPMQASPL  180
AQVQPRPLDN QDQEETRCSS ESSPERKRLR LSLDGQPGSS RSTPASAAGH NDRHQEPQGD  240
DREISSDDAE EHDELSGAIG QCAAILSGAL ESREAAEERR HREVMAVEER RSVARQARRE  300
AGEQCMAGLA AAVGQLAGSM LALAAKHEGP AAPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31310.12e-41Trihelix family protein