PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG071530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRAS | ||||||||
Protein Properties | Length: 258aa MW: 28363.7 Da PI: 6.401 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 228.3 | 3.7e-70 | 7 | 258 | 1 | 263 |
GRAS 1 lvelLlecAeavssgdle.laqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsP 89 l+elL++cA+a++ +d + +a+a+L++l++ + ++g+p+qRl ay++e+Laarla k+ + +et s+e+++++k + ++P TRIDC4AG071530.1 7 LKELLIACATAIEGEDRSmKADAMLEELRKSvSVSAGEPLQRLGAYMVEGLAARLAC------KKPKGRET----STEQIMYDKEtlYEACCP 89 5799**********998879***********455667*******************8......44444444....4566666554448889** PP GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180 ++k ++ +aN aI eave++++vHiiDf is G QW+ +++aL++R +gpp++RiTg++++ + + +le+t rL+ A ++gvp+ef++ TRIDC4AG071530.1 90 YFKGGYGAANAAIIEAVERQDKVHIIDFRISAGHQWVHIIRALSKRVGGPPTIRITGIDDSVPAyaRGSMLEQTSMRLRFSAVKFGVPMEFHA 182 ************************************************************88878899************************* PP GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263 va + e++e +L+v pgEal+Vn+ l lh ++ e++rd++L+lvkslsPkvv++veqe+d+++++F++rf+e+l+y TRIDC4AG071530.1 183 -VAISGEQVEEGHLAVVPGEALVVNFNLGLHCIP------EDHRDRILRLVKSLSPKVVTLVEQELDTSTGPFMQRFVETLDY 258 .6889****************************9......7789*************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MTGGSNLKEL LIACATAIEG EDRSMKADAM LEELRKSVSV SAGEPLQRLG AYMVEGLAAR 60 LACKKPKGRE TSTEQIMYDK ETLYEACCPY FKGGYGAANA AIIEAVERQD KVHIIDFRIS 120 AGHQWVHIIR ALSKRVGGPP TIRITGIDDS VPAYARGSML EQTSMRLRFS AVKFGVPMEF 180 HAVAISGEQV EEGHLAVVPG EALVVNFNLG LHCIPEDHRD RILRLVKSLS PKVVTLVEQE 240 LDTSTGPFMQ RFVETLDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50600.1 | 4e-80 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG071530.1 |