PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG070440.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 591aa MW: 63835.9 Da PI: 4.6257

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG070440.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	139.9	1.5e-43	45	183	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkd 89 lp+GfrF+Ptdeelv +yLk+k++g+ ++ +i++vd+ vePwdLp + +k+++ ew+fF++rd+ + +++r+ r+t++gyWkatgkd TRIDC4AG070440.2 45 LPVGFRFRPTDEELVRHYLKAKIAGRAHPDLLAIPDVDLAAVEPWDLPaRsVIKSDDPEWFFFARRDRPKYpgKSSRSCRSTAAGYWKATGKD 137 79***********************999899***********5347777888****9855435678999********** PP NAM 90 kevlsk.......kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + + kg+l+g+kktLvf++grap+g +t W+mhey++ TRIDC4AG070440.2 138 RLIRAPgpggcrgKGALIGVKKTLVFHRGRAPRGARTPWIMHEYTA 183 9999999888889*************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
LLPLSSAPLP DSQKERQKSR VFSQPAMTTA AGSESSSSSS TPAVLPVGFR FRPTDEELVR 60 HYLKAKIAGR AHPDLLAIPD VDLAAVEPWD LPARSVIKSD DPEWFFFARR DRPKYPGKSS 120 RSCRSTAAGY WKATGKDRLI RAPGPGGCRG KGALIGVKKT LVFHRGRAPR GARTPWIMHE 180 YTATDPNPQS QSAGPQNDSF VLYRLFNKQD EEAPAPISEP PSTSPPANPL LQQADDTASA 240 SMVEDKASPS DSTQLTPTNV TNDHSSTAHL LAATATGAAE QSADQDAFMA SLEQLPDIEL 300 QAEHQRYDEF PMFNSPMRPY TEFPFIGNMG DAQHDFSMYQ DGTINLDDIL LTPAYDETGA 360 SNPTGSWTPY PEDLLDSMLE SGRSDIINSI GQDMGSMGAA PSAQQQPTAP VELMDLQQGI 420 AARRIRLAYA VDRASASQPI LACDSESEEG EGESAGCSTE SSSSNHEEDD HVNDALFQTM 480 AGDLMHNMAP AQALLVSPVE VADKLQHLSF SDNSILEQEE DGKPRRGAGL KQRVKQDSGQ 540 NGHDQDGLVR NSGCVPGPGD SSSETAVRRS LWVALLVMAP LLVLVLVGVW R

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

LLPLSSAPLP DSQKERQKSR VFSQPAMTTA AGSESSSSSS TPAVLPVGFR FRPTDEELVR  60
HYLKAKIAGR AHPDLLAIPD VDLAAVEPWD LPARSVIKSD DPEWFFFARR DRPKYPGKSS  120
RSCRSTAAGY WKATGKDRLI RAPGPGGCRG KGALIGVKKT LVFHRGRAPR GARTPWIMHE  180
YTATDPNPQS QSAGPQNDSF VLYRLFNKQD EEAPAPISEP PSTSPPANPL LQQADDTASA  240
SMVEDKASPS DSTQLTPTNV TNDHSSTAHL LAATATGAAE QSADQDAFMA SLEQLPDIEL  300
QAEHQRYDEF PMFNSPMRPY TEFPFIGNMG DAQHDFSMYQ DGTINLDDIL LTPAYDETGA  360
SNPTGSWTPY PEDLLDSMLE SGRSDIINSI GQDMGSMGAA PSAQQQPTAP VELMDLQQGI  420
AARRIRLAYA VDRASASQPI LACDSESEEG EGESAGCSTE SSSSNHEEDD HVNDALFQTM  480
AGDLMHNMAP AQALLVSPVE VADKLQHLSF SDNSILEQEE DGKPRRGAGL KQRVKQDSGQ  540
NGHDQDGLVR NSGCVPGPGD SSSETAVRRS LWVALLVMAP LLVLVLVGVW R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.3	3e-56	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG070440.2