PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG068650.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 376aa    MW: 41749.8 Da    PI: 6.5063
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG068650.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS384.31.5e-11723752373
              GRAS   2 velLlecAeavssgdle......laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                       +elL+ cA+av++++++        q ++ +l++++s  gdp+qRl ay++eAL ar+++s+++++kal++ +      ++ +++++l++e +
  TRIDC4AG068650.4   2 KELLIVCAKAVADDKATniscssISQDIIVELRKMVSVCGDPLQRLGAYMLEALIARIFSSGHSVCKALESDA------EDFISYRNLLFESC 88 
                       789*********988774445556799*********************************9999998776655......579*********** PP

              GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfef 178
                       P+lkf++l a  aI ea++ge+r+HiiDf++  G+QW++LlqaLa R++g+p +RiTg++++ +     + +le +g+rL+++A +++vpfef
  TRIDC4AG068650.4  89 PYLKFAYLSATGAIAEATNGEDRIHIIDFSVCDGAQWVTLLQALARRAGGAPAVRITGIDDSVQAytlGRSKLELVGRRLSRIAGACNVPFEF 181
                       *************************************************************88779999************************ PP

              GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfds 270
                        + va + ++l+  +L v +gE++aVn+ l lh++ d++ s+ s+rd++Lkl +slsP++v++ve+e+++ ++++F++rf+e+l+yy+a+f+s
  TRIDC4AG068650.4 182 CA-VAITASQLKAGHLGVIRGEVVAVNFNLGLHKISDDDESSLSQRDRILKLARSLSPRLVTLVEHELNTnEATTFADRFAETLDYYTAVFES 273
                       **.7999***************************************************************45569****************** PP

              GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWk 363
                       ++ +l r+++eri +E+++lg++ vn++acegaer+erhe +++W++rl +aGF+p pls+++++++k +l +++ + yr ee++g l+lgWk
  TRIDC4AG068650.4 274 VDLSLRRDANERIDMEQHCLGKDMVNLIACEGAERVERHELFGQWKARLIKAGFTPSPLSSHVNDTIKKMLLRYSCH-YRFEERDGVLYLGWK 365
                       ***************************************************************************77.*************** PP

              GRAS 364 drpLvsvSaW 373
                       drpLv++SaW
  TRIDC4AG068650.4 366 DRPLVVTSAW 375
                       ********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MKELLIVCAK AVADDKATNI SCSSISQDII VELRKMVSVC GDPLQRLGAY MLEALIARIF  60
SSGHSVCKAL ESDAEDFISY RNLLFESCPY LKFAYLSATG AIAEATNGED RIHIIDFSVC  120
DGAQWVTLLQ ALARRAGGAP AVRITGIDDS VQAYTLGRSK LELVGRRLSR IAGACNVPFE  180
FCAVAITASQ LKAGHLGVIR GEVVAVNFNL GLHKISDDDE SSLSQRDRIL KLARSLSPRL  240
VTLVEHELNT NEATTFADRF AETLDYYTAV FESVDLSLRR DANERIDMEQ HCLGKDMVNL  300
IACEGAERVE RHELFGQWKA RLIKAGFTPS PLSSHVNDTI KKMLLRYSCH YRFEERDGVL  360
YLGWKDRPLV VTSAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-130GRAS family protein