PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG066220.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 699aa MW: 79284.5 Da PI: 6.9592

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG066220.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.2	1.2e-22	77	163	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++Y++++GFsvrk k+++ + +++i ++++ Cskeg +e ek + +e+ + ++trt+C+a+++ + +++g+w+v++l+++HnH+l+ TRIDC4AG066220.5 77 LYCDYGHRTGFSVRKGKQSYFTGTKRIRTKDYFCSKEGLKEAEKLT--DENFNDPHTRTNCRAMVRFRANSQGEWRVIRLVSDHNHNLV 163 7***************************************9988..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 699 aa Download sequence
ADQCEGARLQ DSGAAVSIEG AREGEVPVSH PGGGMRVRGA TVEEAENEEA PTVQGSKEGA 60 EELLLKVVYS EEEAYKLYCD YGHRTGFSVR KGKQSYFTGT KRIRTKDYFC SKEGLKEAEK 120 LTDENFNDPH TRTNCRAMVR FRANSQGEWR VIRLVSDHNH NLVRPEERHL LRSAKSLIAG 180 RSCSAADAVL YGGYQLGGAP SQMAASTSVA NNAETQRQDL LPGFSGITRT SAVGTGELQS 240 IVSHLKSRAN VDGMFYWDVQ LDRAGRMSNF FWRDGRSRMD YDCFGDVVVF DSTYRLNKQN 300 YIVAPFVGVN HHWQTTMYGC ALLADDSMAS FTWLFKSFLE AMGNRQPRSI FTNQDQVMSN 360 AIEEVFPNTC HRIAHWHIQK NAASRLGALN ASKAFNKMFT KCMQGCDSEA EFEGTWAAML 420 REFKLQDNKW LSKLYKLKQK WCGALNKCTF DGGVENEPQC DSLSNIFTCI VDKSTSLSTM 480 VAAVDKLTED WREKEFDEDV RCCQRPLSCI IKHSDILNHA AKVYTHRIYK LFETYFLDGC 540 GATKFKALPC EDSDTYRFEM TMQGRGSRVC TVHLNMSTMQ LTCSCSQFET MGLLCPHTLK 600 ALSIKNVGKI PEIYILKRWT RDAKQWVFNP KQYESSFQEC MDDEAGYCNH AMRYAYDLVM 660 KSEGQEELRR SLWQALESGE KELEKYLENA TQYPQSYAT

Sequence ? help Back to Top

Protein Sequence Length: 699 aa Download sequence

ADQCEGARLQ DSGAAVSIEG AREGEVPVSH PGGGMRVRGA TVEEAENEEA PTVQGSKEGA  60
EELLLKVVYS EEEAYKLYCD YGHRTGFSVR KGKQSYFTGT KRIRTKDYFC SKEGLKEAEK  120
LTDENFNDPH TRTNCRAMVR FRANSQGEWR VIRLVSDHNH NLVRPEERHL LRSAKSLIAG  180
RSCSAADAVL YGGYQLGGAP SQMAASTSVA NNAETQRQDL LPGFSGITRT SAVGTGELQS  240
IVSHLKSRAN VDGMFYWDVQ LDRAGRMSNF FWRDGRSRMD YDCFGDVVVF DSTYRLNKQN  300
YIVAPFVGVN HHWQTTMYGC ALLADDSMAS FTWLFKSFLE AMGNRQPRSI FTNQDQVMSN  360
AIEEVFPNTC HRIAHWHIQK NAASRLGALN ASKAFNKMFT KCMQGCDSEA EFEGTWAAML  420
REFKLQDNKW LSKLYKLKQK WCGALNKCTF DGGVENEPQC DSLSNIFTCI VDKSTSLSTM  480
VAAVDKLTED WREKEFDEDV RCCQRPLSCI IKHSDILNHA AKVYTHRIYK LFETYFLDGC  540
GATKFKALPC EDSDTYRFEM TMQGRGSRVC TVHLNMSTMQ LTCSCSQFET MGLLCPHTLK  600
ALSIKNVGKI PEIYILKRWT RDAKQWVFNP KQYESSFQEC MDDEAGYCNH AMRYAYDLVM  660
KSEGQEELRR SLWQALESGE KELEKYLENA TQYPQSYAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-86	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG066220.5