PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG066220.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 726aa MW: 81659 Da PI: 6.4633

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG066220.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.1	1.2e-22	109	195	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++Y++++GFsvrk k+++ + +++i ++++ Cskeg +e ek + +e+ + ++trt+C+a+++ + +++g+w+v++l+++HnH+l+ TRIDC4AG066220.4 109 LYCDYGHRTGFSVRKGKQSYFTGTKRIRTKDYFCSKEGLKEAEKLT--DENFNDPHTRTNCRAMVRFRANSQGEWRVIRLVSDHNHNLV 195 7***************************************9988..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
QAMVNTDGEG AGAGGGDPMC VDESAAVVAE LGADQCEGAR LQDSGAAVSI EGAREGEVPV 60 SHPGGGMRVR GATVEEAENE EAPTVQGSKE GAEELLLKVV YSEEEAYKLY CDYGHRTGFS 120 VRKGKQSYFT GTKRIRTKDY FCSKEGLKEA EKLTDENFND PHTRTNCRAM VRFRANSQGE 180 WRVIRLVSDH NHNLVRPEER HLLRSAKSLI AGRSCSAADA VLYGGYQLGG APSQMAASTS 240 VANNAETQRQ DLLPGFSGIT RTSAVGTGEL QSIVSHLKSR ANVDGMFYWD VQLDRAGRMS 300 NFFWRDGRSR MDYDCFGDVV VFDSTYRLNK QNYIVAPFVG VNHHWQTTMY GCALLADDSM 360 ASFTWLFKSF LEAMGNRQPR SIFTNQDQVM SNAIEEVFPN TCHRIAHWHI QKNAASRLGA 420 LNASKAFNKM FTKCMQGCDS EAEFEGTWAA MLREFKLQDN KWLSKLYKLK QKWCGALNKC 480 TFDGGVENEP QCDSLSNIFT CIVDKSTSLS TMVAAVDKLT EDWREKEFDE DVRCCQRPLS 540 CIIKHSDILN HAAKVYTHRI YKLFETYFLD GCGATKFKAL PCEDSDTYRF EMTMQGRGSR 600 VCTVHLNMST MQLTCSCSQF ETMGLLCPHT LKALSIKNVG KIPEIYILKR WTRDAKQWVF 660 NPKQYESSFQ ECMDDEAGYC NHAMRYAYDL VMKSEGQEEL RRSLWQALES GEKELEKYLE 720 NATQHS

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

QAMVNTDGEG AGAGGGDPMC VDESAAVVAE LGADQCEGAR LQDSGAAVSI EGAREGEVPV  60
SHPGGGMRVR GATVEEAENE EAPTVQGSKE GAEELLLKVV YSEEEAYKLY CDYGHRTGFS  120
VRKGKQSYFT GTKRIRTKDY FCSKEGLKEA EKLTDENFND PHTRTNCRAM VRFRANSQGE  180
WRVIRLVSDH NHNLVRPEER HLLRSAKSLI AGRSCSAADA VLYGGYQLGG APSQMAASTS  240
VANNAETQRQ DLLPGFSGIT RTSAVGTGEL QSIVSHLKSR ANVDGMFYWD VQLDRAGRMS  300
NFFWRDGRSR MDYDCFGDVV VFDSTYRLNK QNYIVAPFVG VNHHWQTTMY GCALLADDSM  360
ASFTWLFKSF LEAMGNRQPR SIFTNQDQVM SNAIEEVFPN TCHRIAHWHI QKNAASRLGA  420
LNASKAFNKM FTKCMQGCDS EAEFEGTWAA MLREFKLQDN KWLSKLYKLK QKWCGALNKC  480
TFDGGVENEP QCDSLSNIFT CIVDKSTSLS TMVAAVDKLT EDWREKEFDE DVRCCQRPLS  540
CIIKHSDILN HAAKVYTHRI YKLFETYFLD GCGATKFKAL PCEDSDTYRF EMTMQGRGSR  600
VCTVHLNMST MQLTCSCSQF ETMGLLCPHT LKALSIKNVG KIPEIYILKR WTRDAKQWVF  660
NPKQYESSFQ ECMDDEAGYC NHAMRYAYDL VMKSEGQEEL RRSLWQALES GEKELEKYLE  720
NATQHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-86	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG066220.4