PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG066220.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 729aa MW: 82046.5 Da PI: 6.4188

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG066220.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.1	1.2e-22	107	193	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++Y++++GFsvrk k+++ + +++i ++++ Cskeg +e ek + +e+ + ++trt+C+a+++ + +++g+w+v++l+++HnH+l+ TRIDC4AG066220.3 107 LYCDYGHRTGFSVRKGKQSYFTGTKRIRTKDYFCSKEGLKEAEKLT--DENFNDPHTRTNCRAMVRFRANSQGEWRVIRLVSDHNHNLV 193 7***************************************9988..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 729 aa Download sequence
MVNTDGEGAG AGGGDPMCVD ESAAVVAELG ADQCEGARLQ DSGAAVSIEG AREGEVPVSH 60 PGGGMRVRGA TVEEAENEEA PTVQGSKEGA EELLLKVVYS EEEAYKLYCD YGHRTGFSVR 120 KGKQSYFTGT KRIRTKDYFC SKEGLKEAEK LTDENFNDPH TRTNCRAMVR FRANSQGEWR 180 VIRLVSDHNH NLVRPEERHL LRSAKSLIAG RSCSAADAVL YGGYQLGGAP SQMAASTSVA 240 NNAETQRQDL LPGFSGITRT SAVGTGELQS IVSHLKSRAN VDGMFYWDVQ LDRAGRMSNF 300 FWRDGRSRMD YDCFGDVVVF DSTYRLNKQN YIVAPFVGVN HHWQTTMYGC ALLADDSMAS 360 FTWLFKSFLE AMGNRQPRSI FTNQDQVMSN AIEEVFPNTC HRIAHWHIQK NAASRLGALN 420 ASKAFNKMFT KCMQGCDSEA EFEGTWAAML REFKLQDNKW LSKLYKLKQK WCGALNKCTF 480 DGGVENEPQC DSLSNIFTCI VDKSTSLSTM VAAVDKLTED WREKEFDEDV RCCQRPLSCI 540 IKHSDILNHA AKVYTHRIYK LFETYFLDGC GATKFKALPC EDSDTYRFEM TMQGRGSRVC 600 TVHLNMSTMQ LTCSCSQFET MGLLCPHTLK ALSIKNVGKI PEIYILKRWT RDAKQWVFNP 660 KQYESSFQEC MDDEAGYCNH AMRYAYDLVM KSEGQEELRR SLWQALESGE KELEKYLENA 720 TQYPQSYAT

Sequence ? help Back to Top

Protein Sequence Length: 729 aa Download sequence

MVNTDGEGAG AGGGDPMCVD ESAAVVAELG ADQCEGARLQ DSGAAVSIEG AREGEVPVSH  60
PGGGMRVRGA TVEEAENEEA PTVQGSKEGA EELLLKVVYS EEEAYKLYCD YGHRTGFSVR  120
KGKQSYFTGT KRIRTKDYFC SKEGLKEAEK LTDENFNDPH TRTNCRAMVR FRANSQGEWR  180
VIRLVSDHNH NLVRPEERHL LRSAKSLIAG RSCSAADAVL YGGYQLGGAP SQMAASTSVA  240
NNAETQRQDL LPGFSGITRT SAVGTGELQS IVSHLKSRAN VDGMFYWDVQ LDRAGRMSNF  300
FWRDGRSRMD YDCFGDVVVF DSTYRLNKQN YIVAPFVGVN HHWQTTMYGC ALLADDSMAS  360
FTWLFKSFLE AMGNRQPRSI FTNQDQVMSN AIEEVFPNTC HRIAHWHIQK NAASRLGALN  420
ASKAFNKMFT KCMQGCDSEA EFEGTWAAML REFKLQDNKW LSKLYKLKQK WCGALNKCTF  480
DGGVENEPQC DSLSNIFTCI VDKSTSLSTM VAAVDKLTED WREKEFDEDV RCCQRPLSCI  540
IKHSDILNHA AKVYTHRIYK LFETYFLDGC GATKFKALPC EDSDTYRFEM TMQGRGSRVC  600
TVHLNMSTMQ LTCSCSQFET MGLLCPHTLK ALSIKNVGKI PEIYILKRWT RDAKQWVFNP  660
KQYESSFQEC MDDEAGYCNH AMRYAYDLVM KSEGQEELRR SLWQALESGE KELEKYLENA  720
TQYPQSYAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-86	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG066220.3