PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG065110.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 368aa MW: 39738.9 Da PI: 8.797

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG065110.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.3	1.6e-24	99	143	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep+rCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TRIDC4AG065110.3 99 DPEPWRCRRTDGKKWRCSKEAHPDSKYCERHMHRGRNRSRKPVES 143 79****************************************986 PP
2	QLQ	63.2	6.8e-22	23	57	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 FT+aQ+++L++Q+l+yKyL+a++PvPp+Ll++i+ TRIDC4AG065110.3 23 VFTPAQWAELEQQALIYKYLMAGVPVPPDLLLPIR 57 5********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
LGGYGQQQQQ QMQMQMQRGA GPVFTPAQWA ELEQQALIYK YLMAGVPVPP DLLLPIRPHH 60 PAAGAAGTTF SFASPAASPF YHHHHPSMSY YAYYGKKLDP EPWRCRRTDG KKWRCSKEAH 120 PDSKYCERHM HRGRNRSRKP VESKSASPAH QSQQPPLSAV TSAARDAEPL PSLPAGAKTH 180 GLSLGGAGSS QMHVDASSYG GKYSLGAKSD VGELSFFSGA SGNNNRGFTI DSPTDSSWHS 240 MGSSLPPYQL SKPRDSGLMQ GGFSYSHYEP SQELGQVTIA SLSHSQEQDR RSFGGGGGGG 300 GGGGGGLMGN VKQENQPLRP FFDEWPGRRD SWSEMDDERS NGTSFSTTQL SISIPMPRCG 360 SSPATFSD

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

LGGYGQQQQQ QMQMQMQRGA GPVFTPAQWA ELEQQALIYK YLMAGVPVPP DLLLPIRPHH  60
PAAGAAGTTF SFASPAASPF YHHHHPSMSY YAYYGKKLDP EPWRCRRTDG KKWRCSKEAH  120
PDSKYCERHM HRGRNRSRKP VESKSASPAH QSQQPPLSAV TSAARDAEPL PSLPAGAKTH  180
GLSLGGAGSS QMHVDASSYG GKYSLGAKSD VGELSFFSGA SGNNNRGFTI DSPTDSSWHS  240
MGSSLPPYQL SKPRDSGLMQ GGFSYSHYEP SQELGQVTIA SLSHSQEQDR RSFGGGGGGG  300
GGGGGGLMGN VKQENQPLRP FFDEWPGRRD SWSEMDDERS NGTSFSTTQL SISIPMPRCG  360
SSPATFSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	8e-38	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG065110.3