PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG062820.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family BBR-BPC
Protein Properties Length: 331aa    MW: 36404.3 Da    PI: 8.7368
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG062820.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind3803.8e-1162533114301
         GAGA_bind  14 yepaaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla...salpvgvqvls 103
                         p++++k++ +++l+++++erd++i er++al+ekkaa+aerdmaf+qrd+a+aern+a+verdn+l+al+l++++     +  +++ ++l+
  TRIDC4AG062820.3  25 MMPQRQMKDHHSMNLLALMSERDTAIMERDHALAEKKAAMAERDMAFAQRDSAMAERNAAIVERDNALAALELARTNGFnmnNGIGFNPGSLN 117
                       34779******************************************************************99888765444777888899** PP

         GAGA_bind 104 gtksidslqqlse.....pqledsave.lreeeklealpieeaaee.akekkkkkkrqrakkpkekkak..kkkkksekskkkvkkesader. 186
                       g+k+ ++++q+ +      ql+ds+++ +re+++++a+pi++a+ + a ++kk+kk++++++p+++ +   +k+kk   ++++  ++++ e+ 
  TRIDC4AG062820.3 118 GAKNFHHHDQQPHaqsspLQLADSPYDhTREMHISDAYPISTAPVSaAGKAKKPKKNSSQASPLKRPSGvlRKTKKAGGDWRDAGMSGVGEDp 210
                       ********99877789999********9*************9976615789999***********9999887777788899999998877556 PP

         GAGA_bind 187 ......skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLa 273
                             +k+e+k++dl+ln+vs+Des++P+P+CsCtG+lrqCYkWGnGGWqS+CCt+++S+yPLPv++++r+aR++grKmS++af+klL++La
  TRIDC4AG062820.3 211 araaseMKNEWKDQDLGLNQVSFDESSMPAPACSCTGVLRQCYKWGNGGWQSSCCTMSMSMYPLPVMPNKRHARMGGRKMSGSAFTKLLSRLA 303
                       788888*************************************************************************************** PP

         GAGA_bind 274 aeGydlsnpvDLkdhWAkHGtnkfvtir 301
                       aeG+dls  vDLkdhWAkHGtn+++tir
  TRIDC4AG062820.3 304 AEGHDLSASVDLKDHWAKHGTNRYITIR 331
                       ***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
IIIVAMICSL EECGSYDSCS MFQWMMPQRQ MKDHHSMNLL ALMSERDTAI MERDHALAEK  60
KAAMAERDMA FAQRDSAMAE RNAAIVERDN ALAALELART NGFNMNNGIG FNPGSLNGAK  120
NFHHHDQQPH AQSSPLQLAD SPYDHTREMH ISDAYPISTA PVSAAGKAKK PKKNSSQASP  180
LKRPSGVLRK TKKAGGDWRD AGMSGVGEDP ARAASEMKNE WKDQDLGLNQ VSFDESSMPA  240
PACSCTGVLR QCYKWGNGGW QSSCCTMSMS MYPLPVMPNK RHARMGGRKM SGSAFTKLLS  300
RLAAEGHDLS ASVDLKDHWA KHGTNRYITI R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-94BBR-BPC family protein