PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG062440.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 290aa MW: 33090.3 Da PI: 10.832 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 161.5 | 3.1e-50 | 11 | 142 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +ppGfrFhPt+eel+++yL+kkv++++++l +vi+++d++k+ePwd+++ ++ + +++wy Fs++dkky+ g+r+nrat++g+Wkatg+dk TRIDC4AG062440.5 11 VPPGFRFHPTEEELLTYYLAKKVASQRIDL-DVIPDIDLNKLEPWDIQErcRIGTgPQNDWYLFSHKDKKYPMGTRTNRATAAGFWKATGRDK 102 69****************************.9***************953444442456********************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++s+ ++ +g++ktLvfykgrap+g+k+dW+mheyrle TRIDC4AG062440.5 103 AIYSAaGSGRIGMRKTLVFYKGRAPHGRKSDWIMHEYRLE 142 ****977788****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MSISVNGQSV VPPGFRFHPT EEELLTYYLA KKVASQRIDL DVIPDIDLNK LEPWDIQERC 60 RIGTGPQNDW YLFSHKDKKY PMGTRTNRAT AAGFWKATGR DKAIYSAAGS GRIGMRKTLV 120 FYKGRAPHGR KSDWIMHEYR LEDAVPVNPG DATYYSNTRR GWRPVVDAGG RVGHLSGVQE 180 EEHRRATPSW PEPWRWRRSV QQRPRQGADD ALLRQRRRAR PHPQLHGPLI HDIVQAGDQA 240 HQPIVVSTGP PDQQSVPQRQ QHPVRQVHEA PAARARRAWP APTATARVQW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 205 | 217 | RQGADDALLRQRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 1e-86 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG062440.5 |