PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG058790.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 358aa MW: 41371.4 Da PI: 5.7951

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG058790.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	42.3	1.3e-13	35	115	13	99
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++ +v+p + +++++ + +++le+++g s v + k +++ ++t GW++Fv +L+ gD ++F+++g+s+f +v +f+k TRIDC4AG058790.2 35 RDEMVIPEELVQRFKRE--ILGEIKLETRNGDSHAVVV--AKIQEKRIFTVGWRQFVANYDLQIGDLLMFRYKGNSQF--NVIIFDK 115 5779*****999755..5559***********..88888889***********************999..8888875 PP
2	B3	33.5	7.2e-11	185	269	15	99
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++p +e+++++ +++++le+++ rs+++ + + + ++ v++ GW +F + gL++gD++v+ ++g+s+f v +f+k TRIDC4AG058790.2 185 EMIIPEGILERFKSE--FPREIKLETQNRRSYKIGVAEnkldTCYNQKLVFSVGWGKFIETFGLQTGDTIVLIYNGNSQF--SVIIFDK 269 589999999999755..8889*************5545544444559*************************9999..8888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MCTSCESCIR RDEYYYRNLD DEKKYFLVLM IGDFRDEMVI PEELVQRFKR EILGEIKLET 60 RNGDSHAVVV AKIQEKRIFT VGWRQFVANY DLQIGDLLMF RYKGNSQFNV IIFDKLGREK 120 ASSAVLDPFI PRVQDRGNEA HEIGSSEKMD VQCGRCNNWL EYHYADLDNE NKYFLMLMMG 180 DFQYEMIIPE GILERFKSEF PREIKLETQN RRSYKIGVAE NKLDTCYNQK LVFSVGWGKF 240 IETFGLQTGD TIVLIYNGNS QFSVIIFDKH GCEKALSVIV DPVPPPVQGR RPCSTDIVKS 300 SHFLPRPMQR QPFIIVNGLL LESPPTEGQW RAQLEMDKSC QGSRAAINTP PFESSGLS

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MCTSCESCIR RDEYYYRNLD DEKKYFLVLM IGDFRDEMVI PEELVQRFKR EILGEIKLET  60
RNGDSHAVVV AKIQEKRIFT VGWRQFVANY DLQIGDLLMF RYKGNSQFNV IIFDKLGREK  120
ASSAVLDPFI PRVQDRGNEA HEIGSSEKMD VQCGRCNNWL EYHYADLDNE NKYFLMLMMG  180
DFQYEMIIPE GILERFKSEF PREIKLETQN RRSYKIGVAE NKLDTCYNQK LVFSVGWGKF  240
IETFGLQTGD TIVLIYNGNS QFSVIIFDKH GCEKALSVIV DPVPPPVQGR RPCSTDIVKS  300
SHFLPRPMQR QPFIIVNGLL LESPPTEGQW RAQLEMDKSC QGSRAAINTP PFESSGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	2e-13	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG058790.2