PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4AG057710.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | Whirly | ||||||||
Protein Properties | Length: 161aa MW: 18475 Da PI: 7.5052 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 171.6 | 1.8e-53 | 1 | 124 | 16 | 139 |
Whirly 16 ptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpdGsGlfvn 108 p+f+ l+sg+ k+ ++G++ll++a+a+++r+ydW +kq+f+ls+ e+++l+ l+ +sceffhdp+++ s+eGkvrk+lkveP pdG G f+n TRIDC4AG057710.2 1 PQFVPLESGAYKVAKEGFVLLQFAPAVGPRQYDWTRKQVFSLSVWEMGTLLTLGLTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNGRFFN 93 78999**************************************************************************************** PP Whirly 109 lsvtnslvkgnesfsvPvskaefavlrsllv 139 lsv+n l++++e++++P++k+e+av+ s ++ TRIDC4AG057710.2 94 LSVQNRLLNVDENIYIPITKGEYAVIVSTFN 124 **************************99875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 161 aa Download sequence |
PQFVPLESGA YKVAKEGFVL LQFAPAVGPR QYDWTRKQVF SLSVWEMGTL LTLGLTDSCE 60 FFHDPFKGRS DEGKVRKVLK VEPTPDGNGR FFNLSVQNRL LNVDENIYIP ITKGEYAVIV 120 STFNYIIPHI MGWSTFTNSI KPEESQPYNR PQSSPELEWR R |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4AG057710.2 |