PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG056400.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 327aa MW: 35492.6 Da PI: 8.8383

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG056400.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.2	9.1e-16	144	195	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +rr+h ++Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i+ A++Y+k+L+ TRIDC4AG056400.2 144 QRRTHIAVERNRRRQMNEYLAALRSLMPQS---YAQRGDQASIVGGAINYVKELE 195 79**************************...*****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
PVSLPPRTVC ATCLLACLVD LRPSPSHSQA VNLLPLAGAR MALEAVVFAQ GHFGYGQAPG 60 LGPWCDMVGA GGFLEDCWDQ QLLAAPVAPN AEDQWEPVSS WDQSEASSEG KAAAPEPAMA 120 AAATGRRKRR RTKIVKNKEE VESQRRTHIA VERNRRRQMN EYLAALRSLM PQSYAQRGDQ 180 ASIVGGAINY VKELEQLLQS LEVQKSVKNR TGRSPFASSF TFPQYSTSCN ATQATASDGG 240 SGADSSGLKS EAGVADIEVT MVEGHASLKV LSRRRPRQLL RLLAGLQQLR IPPLHLNVTT 300 VDAMVLYSFS LKVINLSPYV LCYLVYL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	131	RKRRR
2	127	132	RKRRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	1e-40	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG056400.2