PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG056040.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1070aa MW: 119671 Da PI: 5.8173

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG056040.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.4	7.6e-55	24	140	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r+frkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een +f TRIDC4AG056040.5 24 KEaQTRWLRPTEICEILKNYRNFRIAPEPPNMPASGSLFLFDRKVLRFFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENINF 116 5559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylevk 118 qrr+yw+Lee++ +ivlvhylevk TRIDC4AG056040.5 117 QRRSYWMLEEDYMHIVLVHYLEVK 140 *******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1070 aa Download sequence
GAPQMAEGRR YGIAPQLDME QILKEAQTRW LRPTEICEIL KNYRNFRIAP EPPNMPASGS 60 LFLFDRKVLR FFRKDGHNWR KKKDGKTVKE AHERLKSGSI DVLHCYYAHG EENINFQRRS 120 YWMLEEDYMH IVLVHYLEVK AGKSSSRTRG HDNMLQGAYV DSPLSHLPSQ STDGESSLSG 180 RASEYEAESD IYSGGAGYHS ISRMQQHENG GGSIIDASVV SSYSPASSVG SNHQGLQATS 240 PNTGFYSHYQ DNSPVIHNES TFGITFNGPS TQFDLSSWNE MTKLNKEIHQ LPPYQSHVPS 300 EQPPFTEGPG IESFSFDEVY SNGLDIKDDG HADTDREALW QLPSANDGTT TEFLQLPSAI 360 DGRTTEFQLP SATDSTFATV DNFEQHNKLL EEAINFPVLK TQSSNLSDIL KNSFKKSDSF 420 TRWMSKELAE VDDSQVKFSS GLYWNSEDAD NIIGASSRDQ LDQFTLDPMV AQDQLFSITE 480 YFPSWTYAGS KTRVLVTGRF LTSDEVIKLK WSCMFGEVEV PADILADGTL RCYSPSHKPG 540 RVPFYVTCSN RLACSEVREF EYRPSDSQYM DAPSPHGATN KIYLQACLDE LLSLGRDQQD 600 EFQAALSNPT KELIDLNKKI TSLMTNNDQW SELLKFADDN QLAPDDRQDQ FVESGIKEKL 660 HIWLLHKAGG GGKGPSVLDD EGQGILHLAA ALGYDWAIRP TITAGVSINF RDVHGWTALH 720 WAAFCGRERT VVALIALGAA PGALTDPRPD FPSGRTPADL ASFNGHKGIS GFLAEFSLTS 780 HLQTLNLKEA MGSNASEISG LPGIGDVTGR TASPSAGQGL QAGSMGDPLG AVRNAAQAAA 840 RIYQVFRVQS FQRKQAVQYE DDNGVISDER AMSLLSYKPS KPGQFDPMHA AATRIQNKFR 900 GWKGRKEFLL IRQRIVKIQA HVRGHQVRKH YRKIIWSVGI VEKVILRWRR RGAGLRGFRS 960 TEVATDSSTS SSSVDVIPVK PAEDDYNFLQ EGRKQTEERL QRALARVKSM VQYPEARDQY 1020 QRIMTVVTKM QESQPVEESM LEESTEMDEG FLMSEFKELW DDDMPLPGYF

Sequence ? help Back to Top

Protein Sequence Length: 1070 aa Download sequence

GAPQMAEGRR YGIAPQLDME QILKEAQTRW LRPTEICEIL KNYRNFRIAP EPPNMPASGS  60
LFLFDRKVLR FFRKDGHNWR KKKDGKTVKE AHERLKSGSI DVLHCYYAHG EENINFQRRS  120
YWMLEEDYMH IVLVHYLEVK AGKSSSRTRG HDNMLQGAYV DSPLSHLPSQ STDGESSLSG  180
RASEYEAESD IYSGGAGYHS ISRMQQHENG GGSIIDASVV SSYSPASSVG SNHQGLQATS  240
PNTGFYSHYQ DNSPVIHNES TFGITFNGPS TQFDLSSWNE MTKLNKEIHQ LPPYQSHVPS  300
EQPPFTEGPG IESFSFDEVY SNGLDIKDDG HADTDREALW QLPSANDGTT TEFLQLPSAI  360
DGRTTEFQLP SATDSTFATV DNFEQHNKLL EEAINFPVLK TQSSNLSDIL KNSFKKSDSF  420
TRWMSKELAE VDDSQVKFSS GLYWNSEDAD NIIGASSRDQ LDQFTLDPMV AQDQLFSITE  480
YFPSWTYAGS KTRVLVTGRF LTSDEVIKLK WSCMFGEVEV PADILADGTL RCYSPSHKPG  540
RVPFYVTCSN RLACSEVREF EYRPSDSQYM DAPSPHGATN KIYLQACLDE LLSLGRDQQD  600
EFQAALSNPT KELIDLNKKI TSLMTNNDQW SELLKFADDN QLAPDDRQDQ FVESGIKEKL  660
HIWLLHKAGG GGKGPSVLDD EGQGILHLAA ALGYDWAIRP TITAGVSINF RDVHGWTALH  720
WAAFCGRERT VVALIALGAA PGALTDPRPD FPSGRTPADL ASFNGHKGIS GFLAEFSLTS  780
HLQTLNLKEA MGSNASEISG LPGIGDVTGR TASPSAGQGL QAGSMGDPLG AVRNAAQAAA  840
RIYQVFRVQS FQRKQAVQYE DDNGVISDER AMSLLSYKPS KPGQFDPMHA AATRIQNKFR  900
GWKGRKEFLL IRQRIVKIQA HVRGHQVRKH YRKIIWSVGI VEKVILRWRR RGAGLRGFRS  960
TEVATDSSTS SSSVDVIPVK PAEDDYNFLQ EGRKQTEERL QRALARVKSM VQYPEARDQY  1020
QRIMTVVTKM QESQPVEESM LEESTEMDEG FLMSEFKELW DDDMPLPGYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG056040.5