PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG056040.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1065aa MW: 119230 Da PI: 5.8173

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG056040.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.4	7.6e-55	20	136	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r+frkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een +f TRIDC4AG056040.1 20 KEaQTRWLRPTEICEILKNYRNFRIAPEPPNMPASGSLFLFDRKVLRFFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENINF 112 5559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylevk 118 qrr+yw+Lee++ +ivlvhylevk TRIDC4AG056040.1 113 QRRSYWMLEEDYMHIVLVHYLEVK 136 *******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1065 aa Download sequence
MAEGRRYGIA PQLDMEQILK EAQTRWLRPT EICEILKNYR NFRIAPEPPN MPASGSLFLF 60 DRKVLRFFRK DGHNWRKKKD GKTVKEAHER LKSGSIDVLH CYYAHGEENI NFQRRSYWML 120 EEDYMHIVLV HYLEVKAGKS SSRTRGHDNM LQGAYVDSPL SHLPSQSTDG ESSLSGRASE 180 YEAESDIYSG GAGYHSISRM QQHENGGGSI IDASVVSSYS PASSVGNHQG LQATSPNTGF 240 YSHYQDNSPV IHNESTFGIT FNGPSTQFDL SSWNEMTKLN KEIHQLPPYQ SHVPSEQPPF 300 TEGPGIESFS FDEVYSNGLD IKDDGHADTD REALWQLPSA NDGTTTEFLQ LPSAIDGRTT 360 EFQLPSATDS TFATVDNFEQ HNKLLEEAIN FPVLKTQSSN LSDILKNSFK KSDSFTRWMS 420 KELAEVDDSQ VKFSSGLYWN SEDADNIIGA SSRDQLDQFT LDPMVAQDQL FSITEYFPSW 480 TYAGSKTRVL VTGRFLTSDE VIKLKWSCMF GEVEVPADIL ADGTLRCYSP SHKPGRVPFY 540 VTCSNRLACS EVREFEYRPS DSQYMDAPSP HGATNKIYLQ ACLDELLSLG RDQQDEFQAA 600 LSNPTKELID LNKKITSLMT NNDQWSELLK FADDNQLAPD DRQDQFVESG IKEKLHIWLL 660 HKAGGGGKGP SVLDDEGQGI LHLAAALGYD WAIRPTITAG VSINFRDVHG WTALHWAAFC 720 GRERTVVALI ALGAAPGALT DPRPDFPSGR TPADLASFNG HKGISGFLAE FSLTSHLQTL 780 NLKEAMGSNA SEISGLPGIG DVTGRTASPS AGQGLQAGSM GDPLGAVRNA AQAAARIYQV 840 FRVQSFQRKQ AVQYEDDNGV ISDERAMSLL SYKPSKPGQF DPMHAAATRI QNKFRGWKGR 900 KEFLLIRQRI VKIQAHVRGH QVRKHYRKII WSVGIVEKVI LRWRRRGAGL RGFRSTEVAT 960 DSSTSSSSVD VIPVKPAEDD YNFLQEGRKQ TEERLQRALA RVKSMVQYPE ARDQYQRIMT 1020 VVTKMQESQP VEESMLEEST EMDEGFLMSE FKELWDDDMP LPGYF

Sequence ? help Back to Top

Protein Sequence Length: 1065 aa Download sequence

MAEGRRYGIA PQLDMEQILK EAQTRWLRPT EICEILKNYR NFRIAPEPPN MPASGSLFLF  60
DRKVLRFFRK DGHNWRKKKD GKTVKEAHER LKSGSIDVLH CYYAHGEENI NFQRRSYWML  120
EEDYMHIVLV HYLEVKAGKS SSRTRGHDNM LQGAYVDSPL SHLPSQSTDG ESSLSGRASE  180
YEAESDIYSG GAGYHSISRM QQHENGGGSI IDASVVSSYS PASSVGNHQG LQATSPNTGF  240
YSHYQDNSPV IHNESTFGIT FNGPSTQFDL SSWNEMTKLN KEIHQLPPYQ SHVPSEQPPF  300
TEGPGIESFS FDEVYSNGLD IKDDGHADTD REALWQLPSA NDGTTTEFLQ LPSAIDGRTT  360
EFQLPSATDS TFATVDNFEQ HNKLLEEAIN FPVLKTQSSN LSDILKNSFK KSDSFTRWMS  420
KELAEVDDSQ VKFSSGLYWN SEDADNIIGA SSRDQLDQFT LDPMVAQDQL FSITEYFPSW  480
TYAGSKTRVL VTGRFLTSDE VIKLKWSCMF GEVEVPADIL ADGTLRCYSP SHKPGRVPFY  540
VTCSNRLACS EVREFEYRPS DSQYMDAPSP HGATNKIYLQ ACLDELLSLG RDQQDEFQAA  600
LSNPTKELID LNKKITSLMT NNDQWSELLK FADDNQLAPD DRQDQFVESG IKEKLHIWLL  660
HKAGGGGKGP SVLDDEGQGI LHLAAALGYD WAIRPTITAG VSINFRDVHG WTALHWAAFC  720
GRERTVVALI ALGAAPGALT DPRPDFPSGR TPADLASFNG HKGISGFLAE FSLTSHLQTL  780
NLKEAMGSNA SEISGLPGIG DVTGRTASPS AGQGLQAGSM GDPLGAVRNA AQAAARIYQV  840
FRVQSFQRKQ AVQYEDDNGV ISDERAMSLL SYKPSKPGQF DPMHAAATRI QNKFRGWKGR  900
KEFLLIRQRI VKIQAHVRGH QVRKHYRKII WSVGIVEKVI LRWRRRGAGL RGFRSTEVAT  960
DSSTSSSSVD VIPVKPAEDD YNFLQEGRKQ TEERLQRALA RVKSMVQYPE ARDQYQRIMT  1020
VVTKMQESQP VEESMLEEST EMDEGFLMSE FKELWDDDMP LPGYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG056040.1