PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG054420.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 161aa MW: 17371.9 Da PI: 10.5613 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 61.5 | 1e-19 | 28 | 62 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ C+ttkTplWR gp+g+ +LCnaCG++yrkk++ TRIDC4AG054420.2 28 CTACNTTKTPLWRGGPSGPMSLCNACGIRYRKKRR 62 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
CFASICWQGS GSLDPGERPA AGSQPKACTA CNTTKTPLWR GGPSGPMSLC NACGIRYRKK 60 RREAMGLEDP PKKRQPAAAA APAACSEAGG ESADPEQQQP QQAKKTTTTT KRGREVELRV 120 VGFGKEVVLK QRRRMRRRQR LGEEEKAAIL LMALSSGVIY G |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 131 | 137 | QRRRMRR |
2 | 132 | 138 | RRRMRRR |
3 | 133 | 139 | RRRMRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 1e-22 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG054420.2 |