PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG054100.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 481aa    MW: 54202.7 Da    PI: 7.4563
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG054100.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.31.2e-12441241295
                       HTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3  12 ksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                       +++ l++p + +++   +   + s  ++le+++g +++v++    k g ++lt+GW++Fv+an++++gD ++F + grs+f+ ++k
  TRIDC4AG054100.2  44 NKDFLCIPWEVTRQLrnM--IAHSEPIKLETPDGHVYSVEF---VKFGLITLTTGWRHFVDANHIRQGDPITFVYCGRSTFKVHFK 124
                       456789999999888533..445667***************...5666899******************************88876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    
MDTDEFFNPG CAGTAGDGCD CGDCEERRHD HGRTKHFVLF ASDNKDFLCI PWEVTRQLRN  60
MIAHSEPIKL ETPDGHVYSV EFVKFGLITL TTGWRHFVDA NHIRQGDPIT FVYCGRSTFK  120
VHFKGTSSGH KNSLPSSQQP PNIFRAIPPR DHHVLNEQVV PDPAHVRTST DFGYTMFPGT  180
CLTKAQEKKV LELADSSMRS EIPLHVAAMN KRNANEDYYV YIPLGLLDNF EEGITATTIQ  240
LEAHGNGMVY FVAASKQRDD QIILESELSH FVASLRIQDN DLLVFRSMRK DRLEVFVLDP  300
IGCEKTCFAM GNSSNAREMA STSSRRTKSG HKADKSKKAS LEAPMSNKPY ISTSGTKLTR  360
QQEEKVEEKV QAIGSEFPVF VKVMNERDVW SPKRLSFSLE YASACRLPLE QTHVILGLEG  420
SNMKWSSRMV AQKHKDVRHI SSFWKDLVLL AGMKVGDICL VELADRSSES LTMTVHLIRK  480
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