PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG054100.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 531aa    MW: 59773.8 Da    PI: 7.0786
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG054100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3391.4e-12441241295
                       HTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3  12 ksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                       +++ l++p + +++   +   + s  ++le+++g +++v++    k g ++lt+GW++Fv+an++++gD ++F + grs+f+ ++k
  TRIDC4AG054100.1  44 NKDFLCIPWEVTRQLrnM--IAHSEPIKLETPDGHVYSVEF---VKFGLITLTTGWRHFVDANHIRQGDPITFVYCGRSTFKVHFK 124
                       456789999999888533..445667***************...5666899******************************88876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    
MDTDEFFNPG CAGTAGDGCD CGDCEERRHD HGRTKHFVLF ASDNKDFLCI PWEVTRQLRN  60
MIAHSEPIKL ETPDGHVYSV EFVKFGLITL TTGWRHFVDA NHIRQGDPIT FVYCGRSTFK  120
VHFKGTSSGH KNSLPSSQQP PNIFRAIPPR DHHVLNEQVV PDPAHVRTST DFGYTMFPGT  180
CLTKAQEKKV LELADSSMRS EIPLHVAAMN KRNANEDYYV YIPLGLLDNF EEGITATTIQ  240
LEAHGNGMVY FVAASKQRDD QIILESELSH FVASLRIQDN DLLVFRSMRK DRLEVFVLDP  300
IGCEKTCFAM GNSSNAREVR EDPVEIVDPP QHTVIDLSSD DDEVVEKGTA TSRGKQRPLR  360
GYRAEAQKMA STSSRRTKSG HKADKSKKAS LEAPMSNKPY ISTSGTKLTR QQEEKVEEKV  420
QAIGSEFPVF VKVMNERDVW SPKRLSFSLE YASACRLPLE QTHVILGLEG SNMKWSSRMV  480
AQKHKDVRHI SSFWKDLVLL AGMKVGDICL VELADRSSES LTMTVHLIRK L