PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG053220.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | TCP | ||||||||
Protein Properties | Length: 358aa MW: 37345.6 Da PI: 6.5754 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 117.6 | 1.6e-36 | 76 | 175 | 6 | 98 |
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ka 90 r+ ++hTkv+gR+RR+R++a caar+F+L++eLG+++d++t+ WLlqq++pai ++tgt++ +a ++ +++ + ++ss+ ++ TRIDC4AG053220.2 76 PRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETVRWLLQQSEPAIVAATGTGTVPAIAT-TVDGVLRIPTQSSSsassavvdDE 167 6999********************************************************88888444.222222222222221122222222 PP TCP 91 aksaaksk 98 a+++ +k TRIDC4AG053220.2 168 ASAKRRRK 175 22222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence |
AAPRRGICPA VMESEGQDRP PGERDAHAHA GGVAEPGAMA MVPVPVRGGY MVVPKPEPVE 60 LFGAGGGGMV VRKPPPRNRD RHTKVEGRGR RIRMPAACAA RIFQLTRELG HKSDGETVRW 120 LLQQSEPAIV AATGTGTVPA IATTVDGVLR IPTQSSSSAS SAVVDDEASA KRRRKLQPTR 180 AAGPHATVPP TAAYYSVLAD PLLQGGAGGA AISVASGLAP IGGQQGLVPV FAVPSAAAAA 240 GGNHMIPQAT AVWMVPQPAG APNQPTQYWA FQSAPQLINL AGAQTMPAGA VFPNVAADYH 300 QQRQSASTVV QNTNSDHQQF SHHLTGAESH EQQRRDHHPE EDDADDDDEP VSDSSPED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45680.1 | 6e-46 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG053220.2 |