PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG052990.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 178aa MW: 19345.5 Da PI: 6.6002 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.2 | 2.9e-08 | 141 | 167 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 h ++Er+RR++iN +f eL +++P + TRIDC4AG052990.2 141 EHVMAERKRREKINRRFIELSTVIPGL 167 699**********************75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MDDSNMFIQW AMETLEQEQD GAATGHVFPS SVLELDNSAA PQNGTHMAAY RHRATDSWSS 60 GDSGAAVAVE NDGWSSNCST NHPAASWNFT SVIPHPPSII EEATPSPPAA PSHVVPEMAQ 120 RSPQSRKSSG ASTGMVPTVQ EHVMAERKRR EKINRRFIEL STVIPGLKKV CTVHFSHK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 146 | 151 | ERKRRE |
2 | 147 | 152 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22750.1 | 2e-09 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG052990.2 |