PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG051580.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 750aa MW: 85070 Da PI: 7.3386

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG051580.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.6	8.8e-18	7	91	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA ++GF v+++ks+ + + g + + +vC+++g+ +e+ + r++ +t+C+a+++ +++ dg ++t+++l+HnH+l+p TRIDC4AG051580.3 7 NFYKRYALRTGFGVCVKKSSFT-KAGLCRRLLLVCNRWGNGKEDACY-----QARPTAKTNCQATVVARLWGDGMLHLTDVSLDHNHPLNP 91 6***************9998.6777************9999.....999*******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 750 aa Download sequence
SYEEVLNFYK RYALRTGFGV CVKKSSFTKA GLCRRLLLVC NRWGNGKEDA CYQARPTAKT 60 NCQATVVARL WGDGMLHLTD VSLDHNHPLN PSAARFLRCY KTLPSGMSKD LVVRAARGEC 120 ATSGGDVEAP PMFDDWGRLK IREGDVQAIN GFFAEMQAKQ PNFFYVMDFY VEGHLRSVLW 180 ADSRSREAYQ YFSDAIWVDT TCLRSKFNVP LVLFLGVNHH GQLVLLGCGL LSDESTESFL 240 WLFKAWLTCM KGRLPGAMIT DESVAIKAAV REVFPKTRHR ISDWHIVRSI AEKLGELPEY 300 ESIKVQMEAV IYGSLKDDQF ETRWKNLINR FSLQDNEWII FLYENRHLWV PSFLKDAFWA 360 GLSVNHRESP GAFFDGSVSH ETTLVSFLSN YMILVQYKHK MEQQDDFESL TSGRVLVSKF 420 PMEEQISKLY TLNMFVKFQD ELKSTLDCQV QQVSPSSFVV IDLAEQGTGL VTRKYEVVHC 480 METNRMECNC GLFQFSGIVC RHALSVLKWQ QVYDIPPCYV LNRWRSDFKQ LHALDNPLKD 540 PLVSSNHVER YDHISLQCLR LVEIGMVSDD KYQHALKLIS DMKRTLLDDN LCRELEQKMS 600 PPERAIVVNG DSHAQPGSSE GGPAKKRRGR PPKKSKEISA ESVSNQCGNK ESLLVSSDVS 660 QKGALHSSST ASNLGTHVRA HGVDDLMEEV NANEVSFESR YGVQSSHPNH YGDQLHPSHT 720 LQSNLGESSG CIRLYIRMIK CLMTGGHLES

Sequence ? help Back to Top

Protein Sequence Length: 750 aa Download sequence

SYEEVLNFYK RYALRTGFGV CVKKSSFTKA GLCRRLLLVC NRWGNGKEDA CYQARPTAKT  60
NCQATVVARL WGDGMLHLTD VSLDHNHPLN PSAARFLRCY KTLPSGMSKD LVVRAARGEC  120
ATSGGDVEAP PMFDDWGRLK IREGDVQAIN GFFAEMQAKQ PNFFYVMDFY VEGHLRSVLW  180
ADSRSREAYQ YFSDAIWVDT TCLRSKFNVP LVLFLGVNHH GQLVLLGCGL LSDESTESFL  240
WLFKAWLTCM KGRLPGAMIT DESVAIKAAV REVFPKTRHR ISDWHIVRSI AEKLGELPEY  300
ESIKVQMEAV IYGSLKDDQF ETRWKNLINR FSLQDNEWII FLYENRHLWV PSFLKDAFWA  360
GLSVNHRESP GAFFDGSVSH ETTLVSFLSN YMILVQYKHK MEQQDDFESL TSGRVLVSKF  420
PMEEQISKLY TLNMFVKFQD ELKSTLDCQV QQVSPSSFVV IDLAEQGTGL VTRKYEVVHC  480
METNRMECNC GLFQFSGIVC RHALSVLKWQ QVYDIPPCYV LNRWRSDFKQ LHALDNPLKD  540
PLVSSNHVER YDHISLQCLR LVEIGMVSDD KYQHALKLIS DMKRTLLDDN LCRELEQKMS  600
PPERAIVVNG DSHAQPGSSE GGPAKKRRGR PPKKSKEISA ESVSNQCGNK ESLLVSSDVS  660
QKGALHSSST ASNLGTHVRA HGVDDLMEEV NANEVSFESR YGVQSSHPNH YGDQLHPSHT  720
LQSNLGESSG CIRLYIRMIK CLMTGGHLES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-116	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG051580.3