PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG048720.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 500aa    MW: 54983.9 Da    PI: 4.7143
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG048720.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.81.1e-35341262103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y++++d++++ ++sw   +nsf+v+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll
  TRIDC4AG048720.8  34 FLMKTYDMVDDPATDAVVSWGPANNSFIVWNTPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDK---------WEFANEGFLRGQKHLL 117
                       9********************999*****************************************999.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                       ++i+r+k +
  TRIDC4AG048720.8 118 KTINRRKPS 126
                       ******975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    
VAAAVAAAAA ASTVTTAVAP PGAAGAGAGA PPPFLMKTYD MVDDPATDAV VSWGPANNSF  60
IVWNTPEFAR DLLPKYFKHN NFSSFVRQLN TYGFRKVDPD KWEFANEGFL RGQKHLLKTI  120
NRRKPSHANN QVQQNAPMPS CVEVGKFGME EEIEMLKRDK NVLMQELVRL RQQQQTTDHQ  180
LQTLGKRLHG MEQRQQQMMS FLAKAMQSPG FLAQFVQQNE NSKRRIVAAN KKRRLPKQDD  240
GLNSESALLD GQIIKYQPMI NEAAKAMLRK ILQQDTSPHR FESMANSDNL LLENCMPSAQ  300
TFDSSSSTRN SAVTLAEVPG NSGMPYMPTS SGLSAICSSS SPPEMQRPVL DTNSSTQLPN  360
MSAVPSVPKA MTPGLSDISI PGFPDLHDLI TEDAINIPVE NFTMPGPECI FPLPDEGSDD  420
SVPMDPIDTD ETDDTQKLPG IIDSFWEQFL CASPLSIDND EVDSGLLDTR EAQEENGWTR  480
TENLANLTEQ MGLLSSNHRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16820.21e-121HSF family protein